SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|350272093|ref|YP_004883401.1| from Oscillibacter valericigenes Sjm18-20

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|350272093|ref|YP_004883401.1|
Domain Number 1 Region: 57-148
Classification Level Classification E-value
Superfamily Ribosomal protein L9 C-domain 2.09e-23
Family Ribosomal protein L9 C-domain 0.00032
Further Details:      
 
Domain Number 2 Region: 1-57
Classification Level Classification E-value
Superfamily L9 N-domain-like 8.89e-18
Family Ribosomal protein L9 N-domain 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|350272093|ref|YP_004883401.1|
Sequence length 149
Comment 50S ribosomal protein L9 [Oscillibacter valericigenes Sjm18-20]
Sequence
MKVILMQDVKGQGKKGQMVEVSEGYARNFLLPRKLAAAATADAINTMNLKEKARRAEEQR
QKAEAEATVEKLKECMVKVTAKAGSGGRLFGSVTTKEISEGLMKQYNVDIPKQKLVLEDP
IKAFGSYQIKAKLGFEVTGTVYVSVYEEK
Download sequence
Identical sequences G4KX87
gi|350272093|ref|YP_004883401.1| WP_014119493.1.66763

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]