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Domain assignment for gi|312140420|ref|YP_004007756.1| from Rhodococcus equi 103S

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|312140420|ref|YP_004007756.1|
Domain Number 1 Region: 50-310
Classification Level Classification E-value
Superfamily PLP-binding barrel 4.94e-70
Family Alanine racemase-like, N-terminal domain 0.00000202
Further Details:      
 
Domain Number 2 Region: 288-445
Classification Level Classification E-value
Superfamily Alanine racemase C-terminal domain-like 2.51e-45
Family Eukaryotic ODC-like 0.0000141
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|312140420|ref|YP_004007756.1|
Sequence length 447
Comment diaminopimelate decarboxylase lysa [Rhodococcus equi 103S]
Sequence
MTLLDIFPSLRAAMAPRLDPALWPVTTDHDERGRIRVGGVALDDIADQYGTPTYVLDEDD
VRHRCRAYRTAFPEAEIAYAAKALTTRAVADWVTSEGLSLDVCSEGELAIARSAGVAPSR
IILHGNAKTATELRTAVGVGVGRIVVDSHNEIRLLASLARRRQRVLVRATPDIDIHGHPA
VTTGVDDQKFGFPINGGHLDAAVRLVLEQPSLELVGLHCHLGSQITDVELFASAVDRMIG
RMEQIRRDHGVILTNLNLGGGHAVPYLPGDPQIDLTRLAGVLDDALDEACARNRFPRPGI
TLEPGRGIVARGGVTLYRVVSIKTGSGGRTFVAVDGGMSDNPRVALYGARYDVAVANRHP
TGAHMPVTVVGRHCEAGDVLARDVSLPCDLHPGDVLAVPCTGAYHHCLASTYNSVGRPPM
VAVRGGSARELIRRETAADLLSRDVGL
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Identical sequences E4WJG8
WP_013416557.1.24670 gi|312140420|ref|YP_004007756.1|

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