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Domain assignment for gi|386040044|ref|YP_005958998.1| from Paenibacillus polymyxa M1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|386040044|ref|YP_005958998.1|
Domain Number 1 Region: 210-404
Classification Level Classification E-value
Superfamily PheT/TilS domain 1.07e-73
Family B3/B4 domain of PheRS, PheT 0.00000246
Further Details:      
 
Domain Number 2 Region: 478-708
Classification Level Classification E-value
Superfamily Class II aaRS and biotin synthetases 1.62e-49
Family Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 0.0003
Further Details:      
 
Domain Number 3 Region: 37-197
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 7.35e-47
Family Myf domain 0.0032
Further Details:      
 
Domain Number 4 Region: 716-814
Classification Level Classification E-value
Superfamily Anticodon-binding domain of PheRS 1.31e-32
Family Anticodon-binding domain of PheRS 0.00063
Further Details:      
 
Domain Number 5 Region: 414-486
Classification Level Classification E-value
Superfamily Putative DNA-binding domain 2.66e-17
Family Domains B1 and B5 of PheRS-beta, PheT 0.0047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|386040044|ref|YP_005958998.1|
Sequence length 815
Comment phenylalanyl-tRNA synthetase beta subunit [Paenibacillus polymyxa M1]
Sequence
MKVSFDWLSEYVSLDQVSAEELAEKITRSGIEIDEVEHRNQGITGVVVGYVKSKEKHPDA
DKLNVCIVDAGQGEDLQIVCGAKNVDAGQKVPVAVVGAKLPGDFHIKKAKLRGVVSMGMI
CSAKELGMNDKLLPKELQEGILVLPEDAEIGTPITKLLALDDQVLDFDLTPNRSDCLSMH
GAAYEVSAILGRNISLADPAKDLVEINDAAADHLSVKVDTPELCTHYAARYITGVKVGPS
PLWIQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDADKLENGNIEVRLARTGETLIT
LDDQERKLEPHMLLITDGVKPIALAGVMGGANSEVTDATVSIALESAKFDGGTVRKTSRQ
LGLRSEASLRFEKEVDPGAVIPAVNRAAALIQRYAGGTVHQGIVESASAKAENHIIKLSL
DKINRYLGTELSLLEVKTIFGRLHFGCGDTEPGVLEVEVPTRRGDITIDVDLIEEVARLY
GYDNIPTTPIEGPTTPGALTASQSLRRSLRRLLAHGGWQETISYSFVHPQSTALFNALTE
GSHPVRLAMPMSEDRSVLRTSIIPQMLDTAVYNMNRKQDNLAIFEMGTVFYTEEQTLTRQ
PQEIQVLSLLLTGVRREKQWNIGAEKVDFFDIKGALETVFDYFGLSASIRYVADQPQSYH
PGRSASVWLDVNGSSQRIGTVGQIHPELQQSYGLNDTYVAEIALQQLVEHANSHIQFREL
ARFPSVERDIALVVNKDVEAGELLRVIHAAGGELLQDARVFDVFTGSKLGEDKKSVAISL
TYRHWEHTLTDEEINAAHSPVVTSLEQTFGAELRK
Download sequence
Identical sequences E3EFH6
gi|386040044|ref|YP_005958998.1| WP_013370094.1.14980 WP_013370094.1.91857 gi|310640950|ref|YP_003945708.1|

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