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Domain assignment for gi|386041058|ref|YP_005960012.1| from Paenibacillus polymyxa M1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|386041058|ref|YP_005960012.1|
Domain Number 1 Region: 2-96
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 3.53e-22
Family Sigma2 domain of RNA polymerase sigma factors 0.0016
Further Details:      
 
Domain Number 2 Region: 105-162
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 8.6e-16
Family Sigma4 domain 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|386041058|ref|YP_005960012.1|
Sequence length 175
Comment RNA polymerase sigma factor sigW Sigma-W factor [Paenibacillus polymyxa M1]
Sequence
MDLTEKAELATQGDKEAFVDVIRAVQQSLYVIARSIVKNEEDCADAIQETIAKAFSNVHR
LKEPAYFKTWIIRILINECNRIIRKKKRVSPVPYDIRKSSYKSDYEQIELFEVIDGLDEQ
LQTTVTLFYIEDLSVKEISKVLNVSEGTVKSRLFRARQQLSELALGEGEAKYELS
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Identical sequences E3EI15
WP_013371208.1.14980 WP_013371208.1.91857 gi|310642087|ref|YP_003946845.1| gi|386041058|ref|YP_005960012.1|

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