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Domain assignment for gi|507717123|ref|YP_008049732.1| from Paenibacillus polymyxa M1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|507717123|ref|YP_008049732.1|
Domain Number 1 Region: 4-81
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 2.35e-17
Family Sigma2 domain of RNA polymerase sigma factors 0.0046
Further Details:      
 
Domain Number 2 Region: 111-153
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.0000000000654
Family YlxM/p13-like 0.056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|507717123|ref|YP_008049732.1|
Sequence length 158
Comment RNA polymerase sigma factor sigM [Paenibacillus polymyxa M1]
Sequence
MDIKDLEDLYVSCKSDLFGYLLRMLHNKQDAEDLLQECFIRFIRASPDLPEDRIRFYLLR
IAKNLAIDLMRKRKKLDEYTLRKEMLYYHWDTFDFEIQEEVNRILLLASNTEQRTVLELR
LVQGYSIKETARILNKSENAVKSSLHRASQRIKLRFIS
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Identical sequences WP_016324704.1.91857 gi|507717123|ref|YP_008049732.1|

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