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Domain assignment for gi|507717744|ref|YP_008050353.1| from Paenibacillus polymyxa M1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|507717744|ref|YP_008050353.1|
Domain Number 1 Region: 5-74
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 5.89e-18
Family Sigma2 domain of RNA polymerase sigma factors 0.0029
Further Details:      
 
Domain Number 2 Region: 104-161
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.00000000000000991
Family Sigma4 domain 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|507717744|ref|YP_008050353.1|
Sequence length 186
Comment RNA polymerase sigma-E factor [Paenibacillus polymyxa M1]
Sequence
MESNRELFDLYQRDVYRTCYYMVHNASDAEDLTQEVFITLFRSNREHIEQLKAWIMKVTV
NHCLNHLKRRKSLHLKVSANPHLFTGTENKPVDRQVEERESAEEWAVYMNRLPAKIRAVL
TLRYMHDFTLAEISKLLEIPLGTVKSRTHKGLKLMEQILREAGAQIPELEGENYEQHRKG
IEAQVK
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Identical sequences E3EBW2
WP_013373621.1.14980 WP_013373621.1.91857 gi|310644568|ref|YP_003949327.1| gi|507717744|ref|YP_008050353.1|

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