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Domain assignment for gi|507717945|ref|YP_008050554.1| from Paenibacillus polymyxa M1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|507717945|ref|YP_008050554.1|
Domain Number 1 Region: 3-98
Classification Level Classification E-value
Superfamily Sigma2 domain of RNA polymerase sigma factors 2.88e-22
Family Sigma2 domain of RNA polymerase sigma factors 0.0023
Further Details:      
 
Domain Number 2 Region: 107-178
Classification Level Classification E-value
Superfamily Sigma3 and sigma4 domains of RNA polymerase sigma factors 0.000000000000174
Family Sigma4 domain 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|507717945|ref|YP_008050554.1|
Sequence length 196
Comment RNA polymerase sigma factor sigW [Paenibacillus polymyxa M1]
Sequence
MNEEIEYRIKQVQAGEIQDYAYIVKEYQRQIFVYCWRLLGSEQEAEEAVQDIFVSAFEKI
SRYKPTVGFSSWLYKMAYHHCLNLIRRKNLQRKFKLSLFTSTNMTSDSAAQVMERQLFSE
PLSRALDQLSAEERNLLVLRIFEERTFGEIGEIMNKSEEAIKKKYGRTKTKLKKIMEPLK
EDHKCVSYKTELKNKA
Download sequence
Identical sequences gi|507717945|ref|YP_008050554.1| WP_016324919.1.91857

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