SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSEEUP00000009288 from Erinaceus europaeus 76

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSEEUP00000009288
Domain Number 1 Region: 777-927
Classification Level Classification E-value
Superfamily C-type lectin-like 3.71e-38
Family C-type lectin domain 0.00051
Further Details:      
 
Domain Number 2 Region: 1065-1203
Classification Level Classification E-value
Superfamily C-type lectin-like 2.36e-35
Family C-type lectin domain 0.00017
Further Details:      
 
Domain Number 3 Region: 936-1064
Classification Level Classification E-value
Superfamily C-type lectin-like 5.06e-28
Family C-type lectin domain 0.002
Further Details:      
 
Domain Number 4 Region: 703-771
Classification Level Classification E-value
Superfamily C-type lectin-like 7e-20
Family C-type lectin domain 0.00079
Further Details:      
 
Domain Number 5 Region: 513-580
Classification Level Classification E-value
Superfamily C-type lectin-like 6.24e-19
Family C-type lectin domain 0.0000421
Further Details:      
 
Domain Number 6 Region: 2-56
Classification Level Classification E-value
Superfamily Kringle-like 6.85e-19
Family Fibronectin type II module 0.00071
Further Details:      
 
Domain Number 7 Region: 117-151
Classification Level Classification E-value
Superfamily C-type lectin-like 0.00000129
Family C-type lectin domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSEEUP00000009288   Gene: ENSEEUG00000010146   Transcript: ENSEEUT00000010185
Sequence length 1297
Comment pep:known_by_projection genescaffold:HEDGEHOG:GeneScaffold_5030:76:98878:1 gene:ENSEEUG00000010146 transcript:ENSEEUT00000010185 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence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Download sequence
Identical sequences ENSEEUP00000009288 ENSEEUP00000009288

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]