SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|15832729|ref|NP_311502.1| from Escherichia coli O157:H7 str. Sakai

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|15832729|ref|NP_311502.1|
Domain Number 1 Region: 169-305
Classification Level Classification E-value
Superfamily CBS-domain pair 5.81e-23
Family CBS-domain pair 0.0056
Further Details:      
 
Domain Number 2 Region: 310-392
Classification Level Classification E-value
Superfamily FAD-binding/transporter-associated domain-like 6e-22
Family CorC/HlyC domain-like 0.00013
Further Details:      
 
Weak hits

Sequence:  gi|15832729|ref|NP_311502.1|
Domain Number - Region: 31-122
Classification Level Classification E-value
Superfamily MFS general substrate transporter 0.0811
Family LacY-like proton/sugar symporter 0.059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|15832729|ref|NP_311502.1|
Sequence length 398
Comment hypothetical protein ECs3475 [Escherichia coli O157:H7 str. Sakai]
Sequence
MTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYG
DAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAIT
RMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVPDLEKMTVDDIMVP
RSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKE
TMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFT
TSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVV
GTRVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE
Download sequence
Identical sequences A0A0H3JN05
386585.ECs3475 gi|15832729|ref|NP_311502.1| NP_311502.1.58667 APC64760

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]