SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|386834320|ref|YP_006239635.1| from Pasteurella multocida subsp. multocida str. 3480

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|386834320|ref|YP_006239635.1|
Domain Number 1 Region: 101-289
Classification Level Classification E-value
Superfamily NAD(P)-binding Rossmann-fold domains 1.37e-50
Family Formate/glycerate dehydrogenases, NAD-domain 0.00019
Further Details:      
 
Domain Number 2 Region: 1-121
Classification Level Classification E-value
Superfamily Formate/glycerate dehydrogenase catalytic domain-like 1.08e-28
Family Formate/glycerate dehydrogenases, substrate-binding domain 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|386834320|ref|YP_006239635.1|
Sequence length 316
Comment glycerate dehydrogenase [Pasteurella multocida subsp. multocida str. 3480]
Sequence
MLKIVFLDSTAIPKHIPIPRPSFPHQWVEYEHTTPDQVVERMQDVDIAVTSKVLFSREVM
QQLPKLKLIAITATGTNNVDLVAAQELGITVKNVTGYSSTTVPEHVIGLIYALKHSIMSW
YRDQLSAKWADCKQFCYFDYPITDVKGSTLGVVGRGCLGSEIGRLATALGMNVLYAEHKG
AKTCREGYTPFEEVLAQADILTLHCPLTDTTQNLINQDTLALMKKGAFLINTGRGPLVDE
QALVAALESGHLGGAAVDVLVKEPPEKNNPIIQAATRLPNLIVTPHIAWASDSAVTTLVN
KVKQNIEDFVKNEQIA
Download sequence
Identical sequences gi|383310202|ref|YP_005363012.1| gi|386834320|ref|YP_006239635.1| WP_005726364.1.26777 WP_005726364.1.27592 WP_005726364.1.41297 WP_005726364.1.41657 WP_005726364.1.42512 WP_005726364.1.57956 WP_005726364.1.58111 WP_005726364.1.70689 WP_005726364.1.94432

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]