SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|312114161|ref|YP_004011757.1| from Rhodomicrobium vannielii ATCC 17100

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|312114161|ref|YP_004011757.1|
Domain Number 1 Region: 21-318
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 1.06e-65
Family Phosphate binding protein-like 0.00000654
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|312114161|ref|YP_004011757.1|
Sequence length 331
Comment family 1 extracellular solute-binding protein [Rhodomicrobium vannielii ATCC 17100]
Sequence
MRKTIFAGALSIATIISAIAAQAQELTVYSGRGESFAGPIFKIFEEQTGIKIKARYGSTA
ELSALLKEEGAKSPADVFLAQDAGALIENRPLFADAPKALSETVLPQFRSNDSKWLATSG
RARTLAYSKERVKGDQLPKSAFDLTKPEWKGKVGYSPKNASFQAFLTALRVQEGEEKAKA
FVKGLVDNGAKTYANNVAIVQAIADGEIDAGLVNSYYLTRFVARDAKVPVAQTFFEKGDI
GNLLFVSGAGIVETSKNKADAAKLLDFFLSPAVQQHFASAIGEYPVIKGVIPNPTLTGPL
ATPTDYAPKVPLEKLGDVSATKKLLTELGLL
Download sequence
Identical sequences E3I6L1
gi|312114161|ref|YP_004011757.1| WP_013419060.1.77764

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]