SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|333909122|ref|YP_004482708.1| from Marinomonas posidonica IVIA-Po-181

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|333909122|ref|YP_004482708.1|
Domain Number 1 Region: 99-266
Classification Level Classification E-value
Superfamily SIS domain 3.5e-37
Family mono-SIS domain 0.018
Further Details:      
 
Domain Number 2 Region: 6-83
Classification Level Classification E-value
Superfamily Homeodomain-like 2.69e-19
Family RpiR-like 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|333909122|ref|YP_004482708.1|
Sequence length 287
Comment RpiR family transcriptional regulator [Marinomonas posidonica IVIA-Po-181]
Sequence
MNKHEDIIRKIQERLSTLSKSERKVAEAILADPKTTIHSSIAKLAARAEVSEPTVNRFCR
SLIGSGFPDFKVSLAQSLATGTPYVNLNVEPDDAPGAVTAKIFEAAKSNLTRAQELLPES
LISRAVDVLAQARRIEFYGLGASGPVAKDAHHKFFRLNMPVVAYTDILVQRMAAAGTHPG
DAVVLISYTGRTLPLIETARVAREAGASVIGITNPGSPLTEHCSIVLPIEETEDTDIYTP
MSSRIVYLTLIDALATGVLLKRGPEFNAHLKKLKQSVQDTRLPKVEK
Download sequence
Identical sequences F6CZH7
WP_013797261.1.19944 gi|333909122|ref|YP_004482708.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]