SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|428220339|ref|YP_007104509.1| from Synechococcus sp. PCC 7502

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428220339|ref|YP_007104509.1|
Domain Number 1 Region: 417-608
Classification Level Classification E-value
Superfamily FtsH protease domain-like 3.92e-73
Family FtsH protease domain-like 0.00000292
Further Details:      
 
Domain Number 2 Region: 163-429
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.3e-72
Family Extended AAA-ATPase domain 0.0000000295
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|428220339|ref|YP_007104509.1|
Sequence length 618
Comment ATP-dependent metalloprotease FtsH [Synechococcus sp. PCC 7502]
Sequence
MKDKNNNKKWKNIGLYALLGIVVITLGTALIDNQPQPQEQWRYSQLLDAIESKQGVSRIT
LSSDRTYAEATIPGGINGNKRVRVNLPNDPDFIKTITDNNIELDVAPRRNDGALLQTLTS
FFLPVLLLVGLFFLLRRAQVGPGSQAMNFGKSKARVQMEPQTQVTFSDVAGIEQAKLELT
EVVDFLKNSDRFTAVGAKIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSEFVEMF
VGVGASRVRDLFEQAKTNAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGF
EGNTGIIIIAATNRPDVLDSALLRPGRFDRQVVVDRPDFAGRLEILGVHARGKTLGQDVD
LEKIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDEINDAVDRVLVGPEKKDRVMSD
KRKKLVAYHEAGHALVGALMPDYDPVQKVTIIPRGRAGGLTWFLPTEERMQSRSYLQNQM
AVALGGRLAEEIIFGEEEVTTGASSDLQQVSQIARQMITRFGMSEKLGPVALGRANNNMF
LGRDIASERDFSEETAALIDQEVNILVENAYKTARNVLIQNRHILDRIAELLVERETIDA
SELQEILLENNAQLASVS
Download sequence
Identical sequences K9SRI0
gi|428220339|ref|YP_007104509.1| WP_015167033.1.58188

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]