SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|428222298|ref|YP_007106468.1| from Synechococcus sp. PCC 7502

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|428222298|ref|YP_007106468.1|
Domain Number 1 Region: 7-273
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 5.35e-83
Family G proteins 0.0000867
Further Details:      
 
Domain Number 2 Region: 259-391
Classification Level Classification E-value
Superfamily Translation proteins 9.19e-28
Family Elongation factors 0.0056
Further Details:      
 
Domain Number 3 Region: 391-465
Classification Level Classification E-value
Superfamily EF-G C-terminal domain-like 0.00000000000612
Family EF-G/eEF-2 domains III and V 0.009
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428222298|ref|YP_007106468.1|
Sequence length 528
Comment peptide chain release factor 3 [Synechococcus sp. PCC 7502]
Sequence
MSELAQEVDRRRTFAIISHPDAGKTTLTEKLLLYGGAIHLAGAVKARASQRHVTSDWMEL
EQQRGISITSTVLQFSYMDCCVNLLDTPGHKDFSEDTYRTLAAADNAVMLVDAAKGLETQ
TRKLFEVCKLRSLPIFTFINKLDRPTREPLELLDEIEKELGLIPYAMNWPIGTGDRFRGV
FDRSSRTVHLFKRSGHGQREADVEIMLLDDPRLPQIIDPDLYAQFLEDLEVLETMGAEWN
EAAMHGGSMTPIFFGSAMTNFGVELFLKAFLQHALKPTPHDSTVGEIAPTDEEFSAFVFK
LQANMDPKHRDRIAFVRVCSGKFEKDMTVNHVRSGKTIRLSHAQKLFGQDREIIAEAYAG
DVIGLNNPGTFAIGDTICGTKKFKFAGIPSFSPELFAYLRSPEPSKFKQFRKGVSELKEE
GAIQIMYSVDDAKRDPILGAVGQLQFEVVQFRLQSEYGVETLLDPLPYSVARWVEDGWEA
LEETGRLFNTLVVKDSLDRPVLLFKNIWNLNQVESDHPELKLKAIAPI
Download sequence
Identical sequences K9SVV7
gi|428222298|ref|YP_007106468.1| WP_015168988.1.58188

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]