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Domain assignment for gi|428220732|ref|YP_007104902.1| from Synechococcus sp. PCC 7502

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|428220732|ref|YP_007104902.1|
Domain Number 1 Region: 431-765
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.57e-90
Family WD40-repeat 0.0000127
Further Details:      
 
Domain Number 2 Region: 652-1010
Classification Level Classification E-value
Superfamily Quinoprotein alcohol dehydrogenase-like 1.02e-80
Family Quinoprotein alcohol dehydrogenase-like 0.034
Further Details:      
 
Weak hits

Sequence:  gi|428220732|ref|YP_007104902.1|
Domain Number - Region: 40-249
Classification Level Classification E-value
Superfamily PP2C-like 0.000445
Family PP2C-like 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|428220732|ref|YP_007104902.1|
Sequence length 1057
Comment WD40 repeat-containing protein [Synechococcus sp. PCC 7502]
Sequence
MPSSDELSSGRLLQRSLLPQAIPSYLGLDIAADVWTAVDLGGDYYQFLEQPGILGVAIAD
SSGKSVAGAIHAALFKGQLDAFATQGRLRNPTTVMTSLNQLLCATNTDDAVALAYGVLDL
ETYEFQIGNAGIPGPVIYRAATKSCEETVNPSMALGRYEGIPYRTLTKPFNEGDIAIFFS
DGLYEASNANGDEFGTANDKGISPLKFVISSLAHLPAAKILVGLKLALDKFTGREIPEDD
VSIVVIKLNQKVAMTKTRDCPYQEALQAWMRSDEKDDSALLRGTRLVEALGWAKAQPSLS
RLDTEFLEASERVNEREQMQAQLLEAATSRAAAADRLEKLSQDLAKSLESEKQQRIQAEM
GEISERIVALTMSSEALFLSHNHIEALISSVIAGVKIRQLTSQVTNGIAHLKANTQIRTI
TALEQVIYGIHEYNRYEGHGFWVNKVCFSADGKFLVSASSDRTIKVWNINGTLLQTLYGH
TNWVTSVAISPNGKMIASASRDNMIRLWNWDQTIGAFKETGSTMLKGHDGPVLDVCFSSD
GEYIASAGEDTTVRLWKANGTLIKTFRGGHERWVTCVAFNPNGKEVVSGSADRTLIIWNI
NGAVVKTLKGHDSFVEAVAYEPHGQAIISGSRDRTMKLWGSDGVLLRTFHGHTDKLWSVA
YSPDGKTIASAGSDRTIKVWDTDGTLLRDLAGHGDAVNSIAFSPDGKSLASASRDTTVKL
WNIRGNPLRKLLAQDDVWAAAFSPNGKFIATGGKDKNVNIWNMAGNLVASLSGHNDAINS
ICISPDSSVILSASTDSSIKSWSPDGRAIDTLNGHRSEVYCLSFRSDGQVFASASADNSV
RLWSADGVWLQTLNGHTAEVYAVCFSPDGSMLVTAGKDKIINLWSWDGRLVYSFEGHSAE
VLTLCFSSDNSTFASGSMDQSVKIWSVDGSLLKTLNGHSAEVRSICFSPDGKTIASASED
TLVQLWSLDGTLLRTFNGHKSAVKSISFSANGKILMSASADKSVILWNLDLDNLLMRGCS
WLQEYLKTNTNVSEEDRRNCLGGCSWLYKHLKSNAAS
Download sequence
Identical sequences K9SQA2
WP_015167426.1.58188 gi|428220732|ref|YP_007104902.1|

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