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Domain assignment for gi|53712166|ref|YP_098158.1| from Bacteroides fragilis YCH46

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|53712166|ref|YP_098158.1|
Domain Number 1 Region: 7-357
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 1.05e-73
Family TK-like PP module 0.025
Further Details:      
 
Domain Number 2 Region: 302-486
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 1.23e-55
Family TK-like Pyr module 0.02
Further Details:      
 
Domain Number 3 Region: 499-631
Classification Level Classification E-value
Superfamily TK C-terminal domain-like 1.05e-30
Family Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain 0.0043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|53712166|ref|YP_098158.1|
Sequence length 648
Comment 1-deoxy-D-xylulose 5-phosphate synthase [Bacteroides fragilis YCH46]
Sequence
MKNEPTYSLLNAINYPKDLRQLSVDQLPEVCEELRQDIIKELSCNPGHFAASLGVVELTV
ALHYVYNTPYDRIVWDVGHQAYGHKILTGRREAFSTNRKLGGIRPFPSPEESEYDTFTCG
HASNSISAALGMAVAAERKGEKDRHVVAVIGDGSMSGGLAFEGLNNASSTANNLLIILND
NDMAIDRSVGGMKQYLFNLTTSNRYNQLRFKTSRLLFKMGLLNEERRKALIRLGNSLKSL
AAQQQNIFEGMNIRYFGPIDGHDVKNIARILHDIKDMQGPKILHLHTIKGKGFGPAEKQA
TIWHAPGKFDPVTGKRIVANTDGMPPLFQDVFGHTLVELAEKNKRIMGVTPAMPSGCSMN
MLMDRMPDRAFDVGIAEGHAVTFSGGMAKDGLLPFCNIYSSFMQRAYDNIIHDVAIQKLN
VVFCLDRAGLVGEDGPTHHGVFDMAYLRPIPNLTISSPMDEHELRRLMYTAQLPDKGPFA
IRYPRGRGSLVDWECPLEEIPVGKGRKLKDGNDLAVITIGPIGKLAARAIERAEADTGIS
VAHYDLRFLKPLDEELLHEVGKKFRHIVTIEDGIIKGGMGCAILEFMADNGYYPEIRRIG
VPDQFIEHGSVQQLYHLCGMDEEGIYKVITKNKLRMDAPVESCMATHS
Download sequence
Identical sequences A0A0E2TDQ4 Q5LH44 Q64Y02
gi|53712166|ref|YP_098158.1| gi|60680350|ref|YP_210494.1| WP_010992199.1.21713 WP_010992199.1.22050 WP_010992199.1.26832 WP_010992199.1.37988 WP_010992199.1.51373 WP_010992199.1.54019 WP_010992199.1.58084 WP_010992199.1.6251 WP_010992199.1.76253 WP_010992199.1.95750 YP_098158.1.45732 BfR94 272559.BF0796 295405.BF0873

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