SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|218883812|ref|YP_002428194.1| from Desulfurococcus kamchatkensis 1221n

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|218883812|ref|YP_002428194.1|
Domain Number 1 Region: 193-277
Classification Level Classification E-value
Superfamily Multidrug resistance efflux transporter EmrE 0.000000183
Family Multidrug resistance efflux transporter EmrE 0.017
Further Details:      
 
Domain Number 2 Region: 38-129
Classification Level Classification E-value
Superfamily Multidrug resistance efflux transporter EmrE 0.000000327
Family Multidrug resistance efflux transporter EmrE 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|218883812|ref|YP_002428194.1|
Sequence length 279
Comment hypothetical protein DKAM_0501 [Desulfurococcus kamchatkensis 1221n]
Sequence
MTSIRGDIFLFPVVWVAISSASILVVLSNEPGEVCAFWRLFFSSLTLLPLWIQAKKHVKM
HHVASGIALSLHFILWMRSLFLIPVYTSTLLVVVYPLYSLVVDILVYKYRPSLIQLLGFA
GGITSLTLFLGVNRLALSQGAVLSLLAGLSVTLYFELGRYARGIVKESLVEYAFPTYMSA
TVFTALYNIVSGSRILPSSHLSYLYFILMALIPMMLGHTLMNYLLKHYPVYLVTSVSLGE
PFGAGLLAYMVLGQRISLYNLATGLLTIVSLIAIIRGYR
Download sequence
Identical sequences B8D3Z6
490899.DKAM_0501 gi|218883812|ref|YP_002428194.1| WP_012608169.1.40753

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]