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Domain assignment for gi|56707285|ref|YP_169181.1| from Francisella tularensis subsp. tularensis SCHU S4

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|56707285|ref|YP_169181.1|
Domain Number 1 Region: 492-897
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 3.89e-158
Family DNA polymerase I 0.000000000428
Further Details:      
 
Domain Number 2 Region: 1-164
Classification Level Classification E-value
Superfamily PIN domain-like 1.07e-53
Family 5' to 3' exonuclease catalytic domain 0.0000535
Further Details:      
 
Domain Number 3 Region: 299-487
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.94e-51
Family DnaQ-like 3'-5' exonuclease 0.0000081
Further Details:      
 
Domain Number 4 Region: 166-279
Classification Level Classification E-value
Superfamily 5' to 3' exonuclease, C-terminal subdomain 7.78e-36
Family 5' to 3' exonuclease, C-terminal subdomain 0.00024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|56707285|ref|YP_169181.1|
Sequence length 897
Comment DNA polymerase I [Francisella tularensis subsp. tularensis SCHU S4]
Sequence
MKKIVLVDGSSYLFRAYHALPHLTNSQGEPTGAIIGVINMLKKLPIMYDTEYVAVVFDAK
GKNFRHQLYPQYKAHRKDIDDELRVQIQPLHQIIEKMGFAVIIEDGVEADDVIGTLAQKL
QKQDYQIIISTGDKDMAQLVTDNIVLYDSMKNVTTDVAGVLEKYQISPHQMIDYLALMGD
SSDNIPGIPKVGPKTAVKWLQDYQNIDGIIANQQQIKGKVGENLRNNIDLLKLSYQLATI
KCDLELDLTVEDLKCKAADKAYLIEAYTRYEFKSLLKDLYNSDIKIVTSQAQAADVAIEY
ITITTQTQLDDLIAELEKYDSFAFDTETDSLNTYEANLVGLSFCAKEGRAFYIPLQHRYL
GVPQQLELGFVLDKLKPLFADSKKVKVAHNFKFDEKVLSKYAIEINGKVDDTMIMAYVLK
SSGKHDMDSLSKEHLGIEPIAYTAIAGTGKQQQTLDQVDIEIVAKYAAEDADITFRLFNH
FKALLEQDKVLFKLYCELEMPLTIILNQMEKTGVKIDATKLIQQSASLETSIKELESKCY
NLAGQEFNLSSPVQLREILFEKLGLPPVKKTAKGQVSTSEEVLVQLAEDYEIAALIMKYR
HLSKLKNTYTDKLPKMLDANGRVHTSYNQTGTVTGRLSSSDPNLQNIPIKSPEGRKIREA
FIAEDGYCIVAADYSQIELRIMAHLSKDKNLLKVFNQNLDIHSATAAEVLGISIDEVSSE
QRRKAKAINFGLIYGMSAFGLARQLEIPRAEAQEYIDIYFNRYPSVKEYMTTAKEFAKQN
GYVETILGRRLYLPEINSKNVMQRNAAERAAINAPMQGTAADIIKKAMINVNMMISQEYN
SEIKMVMQVHDELVFEVKKTKLEEIVAKIKSIMEAAVKLNVPLEVNVDSGKSWDQAH
Download sequence
Identical sequences A0A0E2ZLE3 A0A0G2RM79 Q5NIG1
177416.FTT_0111 393115.FTF0111 gi|385793869|ref|YP_005830275.1| WP_003019852.1.11695 WP_003019852.1.1833 WP_003019852.1.19035 WP_003019852.1.2301 WP_003019852.1.25812 WP_003019852.1.31410 WP_003019852.1.36081 WP_003019852.1.3831 WP_003019852.1.38368 WP_003019852.1.38474 WP_003019852.1.38662 WP_003019852.1.40634 WP_003019852.1.44744 WP_003019852.1.52816 WP_003019852.1.56738 WP_003019852.1.5829 WP_003019852.1.59625 WP_003019852.1.61154 WP_003019852.1.65967 WP_003019852.1.66077 WP_003019852.1.66092 WP_003019852.1.67317 WP_003019852.1.75261 WP_003019852.1.77053 WP_003019852.1.80616 WP_003019852.1.82545 WP_003019852.1.87851 WP_003019852.1.98147 YP_169181.1.84429 gi|56707285|ref|YP_169181.1| gi|110669755|ref|YP_666312.1| gi|379716484|ref|YP_005304820.1| gi|379725167|ref|YP_005317353.1|

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