SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|73671129|ref|YP_307144.1| from Methanosarcina barkeri str. Fusaro

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  gi|73671129|ref|YP_307144.1|
Domain Number - Region: 320-348
Classification Level Classification E-value
Superfamily Rubredoxin-like 0.00447
Family Rubredoxin 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|73671129|ref|YP_307144.1|
Sequence length 370
Comment transposase [Methanosarcina barkeri str. Fusaro]
Sequence
MMKAFKFRLYPTPTQSVQLNQHIGSCRFVYNWALDQKIKTYEQTGKSISRFDLNKKLPVL
KASNEWLGEVNSQSLQGMTKQVESAFTRFFREKNGFPKFKSKKNPIQSFPVPQHYSVDFE
NNTVKLPKIEPIKAVFHRKFEGELKTATVSRTCKGHYYISILVEDGNELPTKQKYSESTT
VGLDVGIKDFAILSTGETIENPNYLKNSLNRLKVLQKRVSRKQNGSKNRVKAKHRLAVLH
DKITNQRNDFQNKLSFKLISENQAIALETLNVKGMVKNHHLAQAISDSAWSSFVTKLEYK
TEWYGKTILRIGQFESSSKVCHVCGYHNSYLTLKDREWTCPDCKTKHDRDINAAINIKKF
ALIDQNRIGL
Download sequence
Identical sequences A0A0E3QKC4 Q464X8
269797.Mbar_A3701 WP_011308601.1.36239 WP_011308601.1.74748 gi|73671129|ref|YP_307144.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]