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Domain assignment for ENSCPOP00000004271 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000004271
Domain Number 1 Region: 3-190
Classification Level Classification E-value
Superfamily vWA-like 9.74e-53
Family Integrin A (or I) domain 0.00022
Further Details:      
 
Domain Number 2 Region: 236-358
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000738
Family Growth factor receptor domain 0.017
Further Details:      
 
Domain Number 3 Region: 194-241
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000131
Family EGF-type module 0.022
Further Details:      
 
Domain Number 4 Region: 369-409
Classification Level Classification E-value
Superfamily Chicken cartilage matrix protein 0.0000034
Family Chicken cartilage matrix protein 0.0037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000004271   Gene: ENSCPOG00000004739   Transcript: ENSCPOT00000004789
Sequence length 413
Comment pep:known scaffold:cavPor3:scaffold_18:2587453:2605352:-1 gene:ENSCPOG00000004739 transcript:ENSCPOT00000004789 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
AGICKSRPLDLVFIIDSSRSVRPLEFTKVKTFVSQIIDTLDIGAAATRVALVNYASTVKI
EFQLQTYADKQALKKAVARITPLSTGTMSGLAIQTAMDEAFTVQAGARGPTANIPKVAII
VTDGRPQDQVSEVAARARASGIELYAVGVDRADMESLKTMASEPLGEHVFYVETYGVIEK
LSSRFQETFCALDPCLLGTHQCQHVCVSDGDGRHHCECSQGYTLNSDQRTCAAVNKCALN
THGCEHLCVDEGTGSYHCECYEGHTLNEDKKSCSAQDKCASGTHGCQHICVKDGPGSHHC
ECFEGYTLNADKKTCTVRNKCALGTHGCQHICVSDGAASYHCDCFPGYSLNEDKKTCAAV
EEVRRLVSTEDACGCEASLAFQDKVSSYLQRLNTKLDDILEKLQVHESRQIHR
Download sequence
Identical sequences 10141.ENSCPOP00000004271 ENSCPOP00000004271 ENSCPOP00000004271

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