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  Home > Genomes > Cavia porcellus 69_3 > ENSCPOP00000014227

Domain assignment for ENSCPOP00000014227 from Cavia porcellus 69_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000014227
Domain Number 1 Region: 2066-2216
Classification Level Classification E-value
Superfamily Growth factor receptor domain 9.26e-20
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number 2 Region: 1073-1200
Classification Level Classification E-value
Superfamily Growth factor receptor domain 2.04e-17
Family Growth factor receptor domain 0.021
Further Details:      
 
Domain Number 3 Region: 916-982
Classification Level Classification E-value
Superfamily TB module/8-cys domain 2.22e-17
Family TB module/8-cys domain 0.00096
Further Details:      
 
Domain Number 4 Region: 2004-2075
Classification Level Classification E-value
Superfamily TB module/8-cys domain 2.49e-17
Family TB module/8-cys domain 0.0000949
Further Details:      
 
Domain Number 5 Region: 1802-1927
Classification Level Classification E-value
Superfamily Growth factor receptor domain 3.92e-17
Family Growth factor receptor domain 0.014
Further Details:      
 
Domain Number 6 Region: 1481-1554
Classification Level Classification E-value
Superfamily TB module/8-cys domain 9.16e-16
Family TB module/8-cys domain 0.0000748
Further Details:      
 
Domain Number 7 Region: 2289-2357
Classification Level Classification E-value
Superfamily TB module/8-cys domain 0.00000000000000301
Family TB module/8-cys domain 0.00058
Further Details:      
 
Domain Number 8 Region: 288-353
Classification Level Classification E-value
Superfamily TB module/8-cys domain 0.0000000000000034
Family TB module/8-cys domain 0.0017
Further Details:      
 
Domain Number 9 Region: 1363-1490
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000000895
Family Growth factor receptor domain 0.01
Further Details:      
 
Domain Number 10 Region: 2446-2572
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000000298
Family Growth factor receptor domain 0.013
Further Details:      
 
Domain Number 11 Region: 184-269
Classification Level Classification E-value
Superfamily TB module/8-cys domain 0.0000000000000647
Family TB module/8-cys domain 0.0018
Further Details:      
 
Domain Number 12 Region: 1201-1325
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000173
Family Growth factor receptor domain 0.017
Further Details:      
 
Domain Number 13 Region: 2175-2298
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000000738
Family Growth factor receptor domain 0.014
Further Details:      
 
Domain Number 14 Region: 1560-1615
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000267
Family EGF-type module 0.0011
Further Details:      
 
Domain Number 15 Region: 2401-2455
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000586
Family EGF-type module 0.0062
Further Details:      
 
Domain Number 16 Region: 1964-2017
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000268
Family EGF-type module 0.0049
Further Details:      
 
Domain Number 17 Region: 1644-1705
Classification Level Classification E-value
Superfamily TB module/8-cys domain 0.00000000301
Family TB module/8-cys domain 0.001
Further Details:      
 
Domain Number 18 Region: 1030-1064
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000447
Family EGF-type module 0.0012
Further Details:      
 
Domain Number 19 Region: 2365-2409
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000503
Family EGF-type module 0.017
Further Details:      
 
Domain Number 20 Region: 1920-1962
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000867
Family EGF-type module 0.01
Further Details:      
 
Domain Number 21 Region: 1717-1762
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000232
Family EGF-type module 0.0041
Further Details:      
 
Domain Number 22 Region: 494-539
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000311
Family EGF-type module 0.0068
Further Details:      
 
Domain Number 23 Region: 878-930
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000046
Family EGF-type module 0.0065
Further Details:      
 
Domain Number 24 Region: 735-778
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000461
Family EGF-type module 0.013
Further Details:      
 
Domain Number 25 Region: 2562-2652
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000471
Family Growth factor receptor domain 0.017
Further Details:      
 
Domain Number 26 Region: 1604-1644
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000261
Family EGF-type module 0.01
Further Details:      
 
Domain Number 27 Region: 409-463,509-542
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000267
Family Growth factor receptor domain 0.019
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000014227
Domain Number - Region: 994-1034
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00115
Family EGF-type module 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000014227   Gene: ENSCPOG00000021546   Transcript: ENSCPOT00000027611
Sequence length 2799
Comment pep:novel scaffold:cavPor3:scaffold_195:294949:350368:-1 gene:ENSCPOG00000021546 transcript:ENSCPOT00000027611 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
RGAGGLNMAWGPPAPLLLAWVALSCVAGGIGHWDRAVGPAGAGRVRRRGSPSVLQGPNVC
GSRFHAYCCPGWRTLPGGSQCVVRECWCHQEVGVQAQPNLCTCEPAAAAPSAVSKCRVNC
VSRGSCRECLCQSGYVGVGFCGSPCHPPRPSTAVCDHGCHDGGRCIGPNHCARVCGFLGS
QCERDYRTGPCFSQGGPEGCQHRLTGLVCTRALCCATVGQAWGLPCELCPPQPHPCRRGF
LLNIHTGACQDVDECRAIPGLCQGGTCVNSVGSFECRCPPGHRLSASGVMCEDLRRGTCF
LVLFGGRCAVDLLGHYTRRQCCCDGGQCWAAGSAPELCPPRGSDGFQRLCVQGVLPPTAH
LGPLPAFPGFQSSGRGPALGPAPHGPYGSSGRGVPRPGPVNSHVGTATLNQTGNVCHHFT
DLCPNGRCLPTPSSYRCECKPGYSLDGRGVCIVVGECTSSSPQRPWYCQGHQGCPATLAR
LATRCAPPLTARLLPPDVDECVGGGSGLCRLGRCVNTEGSFRCVCSVGFELSPDGKSCVG
ECLVSLFCLRGSALNSPGGRILSLLVIHLFLLMHDSYIIKSTSLCSAAVGWASSRCSGYS
GPSRSHCGPGRTAAARGRTAWQRFIPTQSWKEEERLRPSGGGTGPWPGCLLPSECFLSPP
VPWFGVECFLCPSRSAKAWDRGCGAGLRRPPGSQGSCISSGCTHQRLCPWPRGLCSSYGC
THSLGYQAGATVKDHTHVDECALNASLCDHGQCRNSPGSYTCSCPQGFTFRQDTETCEGC
THTCLDIHAVGGLCTNGHMQAESLCVPLFTHTRDIPLPQSCPCHDSLEGPCYPLCIMGPS
RWPSCMGALILGFAGQLGLLEPSEEQPAGPQHPLLTPPDVNECESFPGECWSGRCINTEG
SFLCECSLGWSLDALGRGCVDVRLEPCFLHPGEGDCGVPLPGKYRKDVCCCSVGAAWGAE
CESCPEPDSPEFPSLCPRGRGFSGHDLLSGRPMYQDVDECGAFPGLCARGSCRNTAGGFA
LDARERSCRDIDECRISPDLCGQGTCVNTPGSFQCRCFRGYASGPLLMRSCVDPDVDECA
RDPLLCRGGTCTNTDGSYECQCPPGHTLTAEGTACEDVDECALSSSLCPHGRCINVVGAF
QCSCDAGFRASPDRQRCVDADECGVRNGGCAVHCVNTEGSFRCGCGQGYALLPDGRACAD
VDECKENPDICGQGQCANVPGAHRCLCNDGFTATPDMKTCVDVNECDLNPHICLHGNCEN
TAGSFVCHCQLGYITRKGATGCSDVDECELGGHNCDGHASCLNVPGSYRCACQQGFTGDG
FSCEGQARAPLCPPGGLRQSPLSWRLTARVPVIGTSSHASDRDECAEDMDLCENGQCLNV
PGGYRCECEMGFGPTEDHGGCQDVDECALGNFCAFGSCENLPGFFRCACADGYALDRGGG
NCTDVNECADPVNCINGLCVNTPGSYLCRCPRDFELNPSGVGCVDPRAGSCFLDTHDRGD
GGLSCGAEVGAGVTRASCCCSLGRAWGSPCELCPTANSTEYRTLCPGGEGFRPNLLTVIL
EDIDECQELPGLCQGGNCVNTFGSFQCECLPGYHLHQETRRCEDIDECSGHSGICGPGTC
YNTLGNYTCVCPAEYLQVNGGNNCMADMRKSSCFRRYNGTCGNELAFTVTRKLCCCAYNV
GQAWNRPCEASVLLCPADYQLLCGNQVPGFAVDVHTGAPTDIDECGEIPGLCTRGVCINQ
IGSFHCDCPLGFEYDSALLACKGVQGLILCSCALSHPYLREPGSVTCWTQVGHGSTPLGA
CLRQNECQEIPHVCIHGDCVDTEGSYICLCHRGFRASTDGTLCVDLDECKQQPCGNGTCR
NTVGSYTCLCSPGFTATRSGNCVDIDECRTMAGQVCPMGQCLNTAGSFHCLCQGGFELAP
DGKNCVDTNECLTLTGTCLPGTCQNLQGSFRCICPPGFQVQSNHCVDINECLEEPNLCLF
GTCTNSPGSFQCLCPLGFILSDHGHRCFDTRQSVCFTRFEAGKCSAPKALNTTKTRCCCS
RSPGEGWGEPCELCPQEGGAAFQELCPFGYGVVPGPGDAREDVDECAENPGVCGHGLCVN
TDGSFRCQCPSGYSLDPAGLGCVDTDECSAGKPCGEGTCTNVIGGFQCTCAVGFEPGPAA
TCKDIDECSLNPLLCAFRCRNTEGSYLCTCPAGYALREDGATCRDVDECADTSQDCQARG
MLCKNLIGTFECICPVGMRPQPGSGEGCTDEDECHTQPSICTHGHCVNTVGSFRCDCHKG
FQPSPTLTECLDVRQGLCFSEVLQAVCLAHWSSGEAVSRAMCCCGGGRGWGPSCELCPLP
STSAYKKLCPHGSGYSAEGRDVDECRVLAHLCTHGECINSIGSFHCHCQAGYRPDTTATA
CLDVDECSQDPKPCSFHCKNTEGSFLCTCPRGYLLEEDGQACKDLDECSTRQHNCQFLCV
NTVGAFTCRCPPGFTQRQQACFDNNECLAQPSPCGTRGRCLNAPGSFHCECYQGFTLDSS
GHGCKDVDECDEPHRCRHGCQNEVGGYRCSCPQGFTQHSQWAQCVDENKCAVSPAACGSA
SCHNTLGGFHCVCPSGFDFDETLGGCQDVDECAGQGSPCSYSCANMEGGFLCGCPQGYFR
AGQGHCVSALGFSPGPQEAPEEEPLSPEACYECKINGLTPRDRPPRSVHEGHQLSMATLD
AEVPLTLGLKLSCLTQAEHILELRPALQGQGVRYVVARGNGQSFFRMVHRSGLSSLQLGP
RRPGPGKYQLEVVSVAGSQGSPHGPQGRALWLKVQLQLL
Download sequence
Identical sequences ENSCPOP00000014227 10141.ENSCPOP00000014227 ENSCPOP00000014227

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.