SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSCPOP00000020247 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCPOP00000020247
Domain Number 1 Region: 46-202
Classification Level Classification E-value
Superfamily C-type lectin-like 2.1e-35
Family C-type lectin domain 0.00022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000020247   Gene: ENSCPOG00000020509   Transcript: ENSCPOT00000025539
Sequence length 205
Comment pep:known scaffold:cavPor3:scaffold_28:2577374:2586299:1 gene:ENSCPOG00000020509 transcript:ENSCPOT00000025539 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTERTLQWHPLKVWFPAVMSISVLGICFILSTLVNKNNSVYSNIGKRLSKLQSHQRFLIC
VSKSAKLKTPSWSCCPTPWKLFESSCYFIASTSQSWEKSRESCITLQADLAVIRTQEEQD
FIIQNLNKNSAYYLGLSDPEGHRHWQWVDQTPYTNVTFSHEGEPNQPTERCVVVAFRPTT
GRWGWNDIFCDVPQKSLCRMPVIHL
Download sequence
Identical sequences 10141.ENSCPOP00000020247 ENSCPOP00000020247 ENSCPOP00000020247

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]