SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|218246738|ref|YP_002372109.1| from Cyanothece sp. PCC 8801

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|218246738|ref|YP_002372109.1|
Domain Number 1 Region: 28-119
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 1.83e-27
Family Pentapeptide repeats 0.00078
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|218246738|ref|YP_002372109.1|
Sequence length 149
Comment pentapeptide repeat-containing protein [Cyanothece sp. PCC 8801]
Sequence
MNDEQLSIIQKGAIAWNVWRKQNAKDKIDLMKANLKDARLINVDLREAKLIKTDLRKANL
FKANLSKANLFRADLREANLLKTNFKGANLFGVDFAKANLLEADFEGANVKGTNFRGAIN
LRAEQIQVAIFWQEAMYDEPFRKKLGLSK
Download sequence
Identical sequences B7JXY9
gi|257059779|ref|YP_003137667.1| WP_012595225.1.62203 WP_012595225.1.93053 gi|218246738|ref|YP_002372109.1| 395962.Cyan8802_1941 41431.PCC8801_1915

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]