SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|347540058|ref|YP_004847483.1| from Pseudogulbenkiania sp. NH8B

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|347540058|ref|YP_004847483.1|
Domain Number 1 Region: 12-212
Classification Level Classification E-value
Superfamily ClpP/crotonase 9.33e-26
Family Clp protease, ClpP subunit 0.036
Further Details:      
 
Domain Number 2 Region: 386-451
Classification Level Classification E-value
Superfamily NfeD domain-like 0.00000000000759
Family NfeD domain-like 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|347540058|ref|YP_004847483.1|
Sequence length 459
Comment NfeD family protein [Pseudogulbenkiania sp. NH8B]
Sequence
MMKLWHIIMIWLGLLLGGATAATPQPPVMLIPLTGAIGPVGADHVTRSLARAEKEGAQLV
VLQMDTPGGLDTSMRQIIKAILASPVPVASFVAPSGARAASAGTYILYASHIAAMAPGTN
VGAATPIQIGITGAQPEQPSARSGKSSSSEAAQEQGGSTQDTLTHKQINDAAAYIRGLAQ
LRGRDVAWGEQAVREAVSLSADEALARNVIDLTARDVPDLLVKLQGRKVRIGPDERVLHT
AGAAVITLQPDWRSRFLGVIADPSVAMILMVIGIYGLLFEFSNPGFVVPGLVGATCLLLG
LYALQMLPVNYAGLALMLLGLGCMVAEAFLPSFGALGIGGIVMFVIGGVMLIDTDLPGFG
VPIGLIVALAAASGLFIFFISGMALKARRRPVVSGEARLIGSTGEIIDDLQSEGWATIKG
EQWRVESAVPLRRGQRVRVTGRHGLIMRVEPCGETTKGA
Download sequence
Identical sequences G2J4S4
WP_014087339.1.76262 gi|347540058|ref|YP_004847483.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]