SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|331697550|ref|YP_004333789.1| from Pseudonocardia dioxanivorans CB1190

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|331697550|ref|YP_004333789.1|
Domain Number 1 Region: 96-226
Classification Level Classification E-value
Superfamily GntR ligand-binding domain-like 9.42e-30
Family GntR ligand-binding domain-like 0.011
Further Details:      
 
Domain Number 2 Region: 3-71
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 2.45e-19
Family GntR-like transcriptional regulators 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|331697550|ref|YP_004333789.1|
Sequence length 233
Comment GntR family transcriptional regulator [Pseudonocardia dioxanivorans CB1190]
Sequence
MATLAETVADALLDAVVAGRYPAGTALPPEGELAAAHGASRLTVREAVRILRATNVLEVR
RGLGTFVTAPERWRSLDLLVRAHHAGEHGSAVPELLLEARRMVEVGAAQLAAVRRTDEHL
AQLRAGVEEMRAAAAAGDVDVFVDADIAFHDTVMRATGNVFVPFLLEPFGELLVAARRQT
SAVPRIRDNAVTEHARIVDALEAADPDRAREAMESHMSQTQSDLRAHVLGVNP
Download sequence
Identical sequences F4CJS6
WP_013675855.1.25045 gi|331697550|ref|YP_004333789.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]