SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSTOP00000010829 from Ictidomys tridecemlineatus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSTOP00000010829
Domain Number 1 Region: 19-204,298-335
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 3.48e-62
Family Calnexin/calreticulin 0.0001
Further Details:      
 
Domain Number 2 Region: 207-291
Classification Level Classification E-value
Superfamily P-domain of calnexin/calreticulin 1.44e-21
Family P-domain of calnexin/calreticulin 0.00024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSTOP00000010829   Gene: ENSSTOG00000012079   Transcript: ENSSTOT00000012076
Sequence length 384
Comment pep:known_by_projection scaffold:spetri2:JH393406.1:4120400:4140149:1 gene:ENSSTOG00000012079 transcript:ENSSTOT00000012076 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MARARVLIWAVCALRLALATVYFQEEFLDGERWRNRWVQSTNDSQFGHFRVSSGKFYGHK
EKDKGLQTTQNGRFYAISARFKPFSNKGKTLVIQYTVKHEQKMDCGGGYIKIFPADLDQK
NLNGKSQYYIMFGPDICGFDIKKVHVILHFKNQYHSNKKSIRCKVDGFTHLYALVLRPDL
SYEVKVDGQAIESGSIEYDWNLTSFRKMEESAPESKDWNQAKDAKAQDWEQHFLDASASK
PSDWNSELDGDWQASLLQKPPYQGGLKPEGIDKDIWLHRKMKNTNYLTQYDLSEFENIGA
IGLELWQVRSGTIFDNFLITDDEEYAENFAKATWGETKGPEREMDAIQAKEEVKKAREED
EELLAGKFHMRESHFNRYYRRDEL
Download sequence
Identical sequences I3MII4
ENSSTOP00000010829 ENSSTOP00000010829 XP_005333092.1.77405

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]