SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSSTOP00000013206 from Ictidomys tridecemlineatus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSTOP00000013206
Domain Number 1 Region: 337-426
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 1.09e-19
Family Hypoxia-inducible factor Hif2a, C-terminal domain 0.00057
Further Details:      
 
Domain Number 2 Region: 163-215
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.0000000000066
Family Hypoxia-inducible factor Hif2a, C-terminal domain 0.027
Further Details:      
 
Domain Number 3 Region: 60-119
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 0.0000000864
Family HLH, helix-loop-helix DNA-binding domain 0.0072
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSTOP00000013206   Gene: ENSSTOG00000014736   Transcript: ENSSTOT00000014742
Sequence length 931
Comment pep:known_by_projection scaffold:spetri2:JH393304.1:7310005:8143610:1 gene:ENSSTOG00000014736 transcript:ENSSTOT00000014742 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGRAGAAANGTPQNVQGITSYQQRITAQHPLPNQSECRKIYRYDGIYCESTYQNLQALRK
EKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPP
WNLRMEGPPPNTSVKGAQRRRSPSALAIEVFEAHLGSHILQSLDGFVFALNQEGKFLYIS
ETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSASS
SSQSETPEPVESTSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRLR
VSLSHGRTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNIIYCENRISDYMD
LTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNGGYIWIQSSATIA
INAKNANEKNIIWVNYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSDSESDSKDTSGIT
EDNENSKSDEKGNQSENSEDPEPDRKKSGNACDNDMNCNDDGHSSSNPDSRDSDDSFEHS
DFENPKAAEDGFGALGPMQIKVERYVESESDLRLQNCESLTSDSAKDSDSAGEAGAQASS
KHQKRKKRRKRQKGGSTSRRRLSSASSPGGLDAGLVEPPRLLSSPHSASVLKIKTEISEP
INFDNDSSIWNYPPNREISRNESPYSMTKPPSSEHFPSPQGGGGGGGLHVAIPDSVLTPP
GADGAAARKTQFSTSATTALAPVASDPLSPPLSASPRDKHPGGGGSGSGGGSSGGPSASN
SLLYTGDLEALQRLQAGNVVLPLVHRVTGTLAATSTAAQRVYTTGTIRYAPAEVTLAMQG
NLLPNAHAVNFVDVNSPGFGLDPKTPMEMLYHHVHRLNMSGPFGGAVSAASLTQMPAGNV
FTTAEGLFSTLPFPVYSNGIHAAQTLERKED
Download sequence
Identical sequences ENSSTOP00000013206 ENSSTOP00000013206

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]