SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSTOP00000014240 from Ictidomys tridecemlineatus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSTOP00000014240
Domain Number 1 Region: 3-310
Classification Level Classification E-value
Superfamily WD40 repeat-like 2.93e-44
Family WD40-repeat 0.004
Further Details:      
 
Domain Number 2 Region: 198-366,398-566
Classification Level Classification E-value
Superfamily DPP6 N-terminal domain-like 6.47e-29
Family DPP6 N-terminal domain-like 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSTOP00000014240   Gene: ENSSTOG00000015909   Transcript: ENSSTOT00000015911
Sequence length 686
Comment pep:known_by_projection scaffold:spetri2:JH393285.1:19295871:19517229:1 gene:ENSSTOG00000015909 transcript:ENSSTOT00000015911 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGEFKVHRVRFFNYVPPGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHES
RATEALCWAEGQRLFSAGLNGEILEYDLQALNVKYALDAFGGPIWSMTASPSGSQLLVGC
EDGSVKLFQITPDNIQFERNFDRQKSRILSLSWHPSATHIAAGSIDYISVFDVKSGSAVR
KMIVDRQYMGVSKRKCIVWGVAFLSDGTVISVDSAGKVQFWDSATGTLVKSHLISNADVQ
SIAVADQEDSFVVGTAEGTIFHFQLVSVTSNSSEKQWVRTKPFQHHTHDVRAVAHSPTAL
ISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRCLISCSKKKQLLLFQFAHHLELWRL
GSTAATGKNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGSWIAYSTVSRVFLYRLNY
EHDNINLKRVSKMPAFLRSALQIMFSEDSKKLFVASNQGSLHIFQLLEGSFKHLHTFQPQ
SGTVEAMCLLAVSPDGNWLAASGTSAGVHVYNVKHLKLHCTVPAYNFPVTALAIAPITNN
LVIAHSDQQVFEYSIPEKQYTEWSRNIQKQGFHHLWLQRDTPITHISFHPKRPMHILLHD
AYMFCIIDKSLPLPNDKTLLYNPLPPTNESDVFRRRTAHAFKISKIYKPLLFMDLLDERT
LVAVERPLDDIIAQLPPPIKKKKFGT
Download sequence
Identical sequences I3MQK3
ENSSTOP00000014240 ENSSTOP00000014240 XP_005318420.1.77405 XP_013221972.1.77405 XP_021577369.1.77405

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]