SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSTOP00000015905 from Ictidomys tridecemlineatus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSTOP00000015905
Domain Number 1 Region: 81-262
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 5.27e-43
Family Matrix metalloproteases, catalytic domain 0.00011
Further Details:      
 
Domain Number 2 Region: 317-396
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000233
Family I set domains 0.067
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSTOP00000015905   Gene: ENSSTOG00000020131   Transcript: ENSSTOT00000019483
Sequence length 399
Comment pep:known_by_projection scaffold:spetri2:JH393547.1:1629639:1632023:-1 gene:ENSSTOG00000020131 transcript:ENSSTOT00000019483 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGRGACVPPKVSGAVQDRRLGAVLGGLCLFPALLLLARLGAPAAQAGARVGPVCGPAGPP
GVGVCGCGSQVPSPFSPLVPRKRRYTLTPARLRWDHFNLTYRILSFPRNLLSPRETRRGL
AAAFRMWSDVSPFSFREVAPEQPSDLRIGFYPANHTDCLVSALHHCFDGPTGELAHAFFP
PHGGIHFDDSEHWVLGPTRYSWKKGSAGVWLTDLVHVAAHEIGHALGLMHSQHSRALMHL
NATLRGWKALSQDELWGLHRLYGCLDRLFVCASWARKGFCDTRRRLMKRLCPSSCDFCYE
FPFPTVATTPSPPRTKTRLVPEGRNVTFRCGQKILHKKGKVYWYKDQEPLEFSYPGYLAL
GEARLSIIANAVNEGTYTCVVRRHQHVLTTYSWRVRVRS
Download sequence
Identical sequences ENSSTOP00000015905 ENSSTOP00000015905

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]