SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSTOP00000017859 from Ictidomys tridecemlineatus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSTOP00000017859
Domain Number 1 Region: 37-493
Classification Level Classification E-value
Superfamily 2-methylcitrate dehydratase PrpD 7.45e-112
Family 2-methylcitrate dehydratase PrpD 0.0031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSTOP00000017859   Gene: ENSSTOG00000023728   Transcript: ENSSTOT00000019589
Sequence length 511
Comment pep:known_by_projection scaffold:spetri2:JH393321.1:4322196:4327782:-1 gene:ENSSTOG00000023728 transcript:ENSSTOT00000019589 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
HISSSLQVVPNNKKEQTVFFQLWSKTLSLKVSCRKEKSVTESFATLIHGLKVGHLADGVI
QRSKRMILDTLGVGFLGTSTEVFHKASQYRLSLQPKIYSSNISSTIWGQPDFRLPPTYAA
FVNSVAIHSMDFDDTWHPATHPSGAVLPVLIALSEALPQRPKFSGLDLLLAFNVGIEVQG
RLMHFSKEASDIPKRFHPPSVVGTLGSAAAASKFLGLSLTECREALAIAVSYAGAPMANA
ATQTKPLHMGNAARHGIEASFLAMMGLQGNKQILDLETGFGAFYTNYSPKVLPSLDSHAW
LLDQQDVAFKRFPAHLATHWVADAAASVRKHLVGLDRALMPADHIERIVLRVPDVPYVNR
PFPDTEHEARHSFQYVACAMLLDGGITVPSFHLQQINRPQVRELLRKVELEHPWDNLPNF
NTLYSEMSVTLQGGATFTERSDTFYGHWRKPLSQEDLQEKFRANASKTLSCHTAESLIKT
VEKLEDLEDCSVLTTLLKGPSPPEASKLSSM
Download sequence
Identical sequences ENSSTOP00000017859 ENSSTOP00000017859

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]