SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|386014535|ref|YP_005932812.1| from Pseudomonas putida BIRD-1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|386014535|ref|YP_005932812.1|
Domain Number 1 Region: 223-267,299-532
Classification Level Classification E-value
Superfamily NagB/RpiA/CoA transferase-like 5.44e-46
Family CoA transferase alpha subunit-like 0.0079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|386014535|ref|YP_005932812.1|
Sequence length 619
Comment Acetyl-CoA hydrolase-like protein [Pseudomonas putida BIRD-1]
Sequence
MHLCSIDQAVEQVLSRLPTHIHMGLPLGLGKPNAFVNALYARVRELPERRLTIYTALSLG
RPPLGDGLQRRFLEPFVERVFADYEELSYLADLRNDTLPPNIRVEQFFMQPGSLLHSESA
QQDYVSSNYSHAARDINAKGLNLIAQLVAATPEKPVHLSLACNPDITLDLLPMIAKRRAA
GETILMLGQVHAELPYMPGDAELPIDAFDLLLDEAEQRRLFSTPNMPVGIQDHCIGLHAS
SLVRDGGTLQIGIGAMGDAVAAALLARQGDNAGYRAVLKALDVGPWQALIEREGGLDTFA
HGLYGCSEMFVNGLLVLAEAGLLRRPADEQGAILHGGFFLGPQAFYQRLREMPLEQRAQF
VMTRISFINELYGQEEIKRRQRRDARFINTAFGMTLLGAGVADQLEDGRVLSGVGGQYNF
VAQGHALEGGRSILLLRSWREAGGEVTSNLFWTYGHCTIPRHLRDIVVTEYGIADLRGQT
DSEVIARLLAVSDSRFQPGLIKQAKEAGKLADDFQLEARFTDNTLQRLEAISAQHARLFP
AYPMGTDFTAEEQDLLRALNWLKSKFKLSEVLELGKAALDAPGPEGYERHLARMGLEVPQ
GFKEELYQRLLLAGLQATS
Download sequence
Identical sequences WP_014592839.1.34900 WP_014592839.1.62773 gi|386014535|ref|YP_005932812.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]