SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSGACP00000016366 from Gasterosteus aculeatus 76_1

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  ENSGACP00000016366
Domain Number 1 Region: 408-456
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000000000848
Family RING finger domain, C3HC4 0.0032
Further Details:      
Domain Number 2 Region: 1-76
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.00000000000023
Family Ubiquitin-related 0.0012
Further Details:      
Weak hits

Sequence:  ENSGACP00000016366
Domain Number - Region: 328-377
Classification Level Classification E-value
Superfamily RING/U-box 0.00335
Family IBR domain 0.052
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000016366   Gene: ENSGACG00000012371   Transcript: ENSGACT00000016398
Sequence length 465
Comment pep:known_by_projection group:BROADS1:groupVI:17027227:17032869:-1 gene:ENSGACG00000012371 transcript:ENSGACT00000016398 gene_biotype:protein_coding transcript_biotype:protein_coding
Download sequence
Identical sequences G3PFJ2
69293.ENSGACP00000016366 ENSGACP00000016366 ENSGACP00000016366

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]