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Domain assignment for ENSGACP00000016366 from Gasterosteus aculeatus 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSGACP00000016366
Domain Number 1 Region: 408-456
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000000000848
Family RING finger domain, C3HC4 0.0032
Further Details:      
 
Domain Number 2 Region: 1-76
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.00000000000023
Family Ubiquitin-related 0.0012
Further Details:      
 
Weak hits

Sequence:  ENSGACP00000016366
Domain Number - Region: 328-377
Classification Level Classification E-value
Superfamily RING/U-box 0.00335
Family IBR domain 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000016366   Gene: ENSGACG00000012371   Transcript: ENSGACT00000016398
Sequence length 465
Comment pep:known_by_projection group:BROADS1:groupVI:17027227:17032869:-1 gene:ENSGACG00000012371 transcript:ENSGACT00000016398 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MIIYVRYNLGPCVPVELQEEASVADLQQLVGSQQGVHAELLRVLFAGRELKSSFTLQGCD
LPEQSTVHVVLPKSAPTPGHLLLLRERLAGGGQEEGNSLARLDISSSRFPCTPPGLDGSN
GGGGEGAEGGDREQVQAASLKVLCVRTCSTFFVYCKRCKSIQPGKLRVCCSSCRETTFTL
SRGPSCWDDVLLPGRVHGFCQSDACVGNEAEFYMKCASHPTPEDEVSVALDLIMTNSREV
PCMACSDTTELVLVFQCAERHVICLHCFHRYCQTRLNDRRFFSHPVIGYSLPCAAGCADS
LIKELHHFRILGDDQYGRYQKYGAEECLLMNGGLMCPSPGCGAGLIPPDDSRRVTCDRHL
GCGFVFCKCCREGYHEGACLTEQAPPIAESSQGFVVEEEASVKGRWDQASLLLLQETTKR
CPQCSVPVERDGGCMHMQCPLCRAEWCWLCGVSWNTDCMGNHWFG
Download sequence
Identical sequences G3PFJ2
69293.ENSGACP00000016366 ENSGACP00000016366 ENSGACP00000016366

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