SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|56419216|ref|YP_146534.1| from Geobacillus kaustophilus HTA426

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|56419216|ref|YP_146534.1|
Domain Number 1 Region: 295-752
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.81e-60
Family Tandem AAA-ATPase domain 0.019
Further Details:      
 
Domain Number 2 Region: 5-234
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 0.00000168
Family Tandem AAA-ATPase domain 0.077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|56419216|ref|YP_146534.1|
Sequence length 1167
Comment ATP-dependent deoxyribonuclease subunit B [Geobacillus kaustophilus HTA426]
Sequence
MSLRFLLGRSGSGKTAVCLEEIRRQLQEDPKGRAIVYLVPEQMTFQCEYALIHTEGVGGM
IRAQVFSFTRLAWRVLQETGGMTRYHIHDVGVQMMIRKIIEQRKQELKLFGRAADKHGFI
EQLNEMITECKRYCLTPGELRRHAKAFEDGPDQPGRRLLADKLSDVALVYEELERSLIGH
YLDSEDYLRLLAEHIPRSSYLRDADIYIDGFHHFAPQEYMIIEQLLRHCRRVTVCLTIDR
PYDDGMPDELHLFYLPAQTYRQLRELALSNDIAIEEPIVLSANRRHEDRALVHLEAQFHR
RPLLPYGAKTDAVHLYEASNRRAEIEAVAREIIRLVRDEGARYRDIALIIRQTEAYRDLV
KTVFFDFGIPYFMDEKEPMHHHPLIELVRAALETVVTRWRYEAVFRAVKTDLLFPTDGDL
HMWREAADKLENYVLAYGIKGDKWTNNERWAYRRYQALDGLNVPQTDEERQFEDMLNEWR
EALAAPLRRLERRLRRAEDGRGFCMALYLFLEELQIPKKLEKMSAQAEADGRLVEARQHE
QAWNAVVDLLDQYVEMLGTESLPLAEFVKIIEAGLDRLEFSLVPPAMDQVIVAQLDRSRL
IDIKYAFVIGANDGVIPAKVKEDGLMAEVEREQLRELGVALAPGGREQLFYDPFFVYLAL
VCPSRRLYVTYPLADGEGKALMPSPLIKQLTELFPHAPVHLCGNDPFDAPAEKAEAFVTA
PRATQTYLISQLRAWKRNYGIDPLWWDVYNTFIGHRDWKEQVRHAVSALFYTNGATPLKK
QWSQRLYGKKIQASVSRMEQFQKCPYAHFASHGLRLKERNVFRLEAPDVGQLFHAAIKQI
ADRLREQHLDWRELSRPDCERLSAEAVERIAPLIQQQVLSSSHRYEYMKRKLKHVVARTT
HVLSEHARASGFVPIGLELSFGPNGDLPPLRFRLPDGTVMELVGRIDRVDKAESSQGVLL
RIIDYKSSAKTLDLTEVYYGLALQMLTYLDIVLTYAEQLVGQPALPAGVLYFHIHNPIVQ
AKQWVDDEVEMAKKLLEPFRMRGLLLADVEAIRLMDGRTEDGQWSLIVPAQLTKSGSIHS
RSSVASPSDFAALRQHVRRLFIDIGGQIADGVVSIAPYKLKDKTACEFCVFKPVCQFDEA
LSGNEYRKLAPQTKEAVIEKLAEGKEG
Download sequence
Identical sequences Q5L264
235909.GK0681 gi|56419216|ref|YP_146534.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]