SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|549481719|ref|YP_008612140.1| from Salmonella enterica subsp. enterica serovar Thompson str. RM6836

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|549481719|ref|YP_008612140.1|
Domain Number 1 Region: 36-100,163-320
Classification Level Classification E-value
Superfamily Tricorn protease N-terminal domain 0.00000301
Family Tricorn protease N-terminal domain 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|549481719|ref|YP_008612140.1|
Sequence length 943
Comment type IV secretion protein Rhs [Salmonella enterica subsp. enterica serovar Thompson str. RM6836]
Sequence
MTMHREPGGERYYYTWAWFEGPDDAAWRVTGHHTDSGEQYRLDWNLAERSLCVTDSLGRT
RCHWWDAQGLVTAYRDEAGQMTTFRWSDEERLLLGMTDAQGGKWRYVYDRLGHLTETHDP
LGRVEQTQWHPVWHQPETEVDAAGAAWRYEYDERGNLQAVSDPLHQRTVYGYDRHGQVVR
ITDARGGDKYLQWNEDGQLMRHTDCSGSQTAWFYDERTRLERVTDAESNSTRYSYDGNGH
LTEVMFADGRTERYQPDAAGRLVKYTSPAGQITRWQRDGQGRVRRQTDATGRRTAYEYDA
YGRLTTLTNENGESYRFRYDVLDRVTEQTDPGGSRRVYGYNALNAVTAVIYGGERGGEIR
HGLERDAAGRLTAKITPETRTEYRYDAADRVLEIRRRRHDAAEGGEPEVIRFSYDSAGNL
LSEETAQGVLQNRYDVQGNRTETQMPDGRTLRYLYYGSGHLQQINLGRDVISEFTRDHLH
REVQRSQGRLDTRRMYDRTGRLTRKLTCKGMRGVVPETFIDREYAYSGQDELLKKRHSRQ
GVTDYFYDTTGRITACRNEAYLDSWQYDAAANLLDRRQGETAQAGAGSVVPFNRITSYRG
LHYRYDEYGRVVEKRGRNGTQHYRWDAEHRLTEVAVIRGSTVRRYGYVYDAPGRRVEKHE
LDAEGKPYNRTTFLWDGMRLAQECRLGRSSSLYIYSDQGSHEPLARVDRAAPGEADEVLY
YHTDVNGAPEEMTDGGGNIVWEAGYQVWGNLTHEKETRPVQQNLRFQGQYLDRETGLHYN
LYRFYDPDIGKFISGDPISIRGGINLYQYAPNPLSWIDPLGLDVVRVYHYTSKDGYNGIM
GSGTIQTKDPGARGKGSIQGKPQGVYVTTLSPEELKSSGLRGKMGLTKEKSTHFISFEID
SSKVKRVDRQNGYLRLYIEEDIVLRDVNNKLRGDVKHGASGCK
Download sequence
Identical sequences A0A2I6TPG3
gi|549481719|ref|YP_008612140.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]