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Domain assignment for ENSCPOP00000000621 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000000621
Domain Number 1 Region: 439-949
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 5.64e-70
Family Tandem AAA-ATPase domain 0.025
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000000621
Domain Number - Region: 287-321
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 0.00162
Family Double-stranded RNA-binding domain (dsRBD) 0.015
Further Details:      
 
Domain Number - Region: 78-126
Classification Level Classification E-value
Superfamily dsRNA-binding domain-like 0.0132
Family Double-stranded RNA-binding domain (dsRBD) 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000000621   Gene: ENSCPOG00000000699   Transcript: ENSCPOT00000000704
Sequence length 1195
Comment pep:known_by_projection scaffold:cavPor3:scaffold_7:48159018:48180615:1 gene:ENSCPOG00000000699 transcript:ENSCPOT00000000704 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MFSLDSFRKDRAQHRQRQCKLPPPRLPPMCVTPAPGGTISRASRDLLKEFPQPKNLLNSV
IGRALGISHAKDKLVYVHTNGPKKKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQL
FKGWGLLGPRNELFDAAKYRVLADRFGSPADSWWRPEPTMPTTSWRQLNPESIRPGGPGG
LSRTLGRGEEEEDEEEELEEGTIDVTEFLSMTQQDSHTPLRDSRGGSFEMTDDDSAVRAL
TQFPLPKNLLAKVIQIATSSSTAKNLMQFHTVGTKTKLSTLTLLWPCPMTFVAKGRRKAE
AENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRPCTIQVPEPILRKIE
TFLNHYPVESSWLSPELRLQSEDILPLGKDSGPLSDPITGKPFVPLSEAEEVRLSQSLLE
LWRRRGPIWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEG
RGAHCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGI
LLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF
SRYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLV
LHIDAHGEPGGILCFLPGWQEIKGVQQRLQEALGIHESKYLILPVHSNIPMMDQKAIFQQ
PPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR
RGRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKA
VDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPL
LVVVSCLTRDPFSSSLQNRAEVDKVKAILSHDSGSDHLAFVRAVAGWEEVLRWQDRTSRE
NYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNEYSEEEELVKGVL
MAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMA
VKSNGSVFVRDSSQVHPLAVLLLTDGDIHVRDDGRRATISLSDSDLLRLEGDSRTVRLLR
ELRRALGRMVERSLRSELAALPPSVQQEHGQLLALVAELLRGPCGSFDVRKTAED
Download sequence
Identical sequences A0A286XV06
ENSCPOP00000000621 ENSCPOP00000000621 10141.ENSCPOP00000000621 XP_003476954.2.53824

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