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Domain assignment for ENSCPOP00000001346 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000001346
Domain Number 1 Region: 291-348
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.62e-25
Family Classic zinc finger, C2H2 0.0049
Further Details:      
 
Domain Number 2 Region: 459-516
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.7e-24
Family Classic zinc finger, C2H2 0.0058
Further Details:      
 
Domain Number 3 Region: 347-404
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.05e-24
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 
Domain Number 4 Region: 403-460
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.45e-23
Family Classic zinc finger, C2H2 0.0036
Further Details:      
 
Domain Number 5 Region: 235-292
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.79e-23
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 6 Region: 17-78
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 7.98e-23
Family KRAB domain (Kruppel-associated box) 0.0014
Further Details:      
 
Domain Number 7 Region: 501-553
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.26e-21
Family Classic zinc finger, C2H2 0.0026
Further Details:      
 
Domain Number 8 Region: 184-236
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.53e-19
Family Classic zinc finger, C2H2 0.0053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000001346   Gene: ENSCPOG00000001490   Transcript: ENSCPOT00000001510
Sequence length 560
Comment pep:known_by_projection scaffold:cavPor3:scaffold_95:3924878:3937203:-1 gene:ENSCPOG00000001490 transcript:ENSCPOT00000001510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAAAELLPLPAGPQPLSFQAKVTFEDVAVFLSQEEWDRLGPAQRGLYRNVMMETYGNVVS
VGLPGSKPNVICQLERGEDPWVLDEHGTTKSQGLGSDCSDNLHCACTVACMQQDSLSCPW
KCKTKEEDLDTDLSLKPLISEEVKPILGKTSLGETDQEYNTKRNFCLSPSPAGQREAQSS
KGKVALSQHQAVPNGDRPFICIECGKCFGRSSHLLQHQRIHTGEKPYVCSVCGKAFSQSS
VLSKHRRIHTGEKPYECNECGKAFRVSSDLAQHHKIHTGEKPHECLECRKAFTQLSHLIQ
HQRIHTGERPYVCPLCGKAFNHSTVLRSHQRVHTGEKPHQCGECGKTFSVKRTLLQHQRS
HTGEKPYTCSECGKAFSDRSVLIQHHNVHTGEKPYECSECGKTFSHRSTLMNHERIHTEE
KPYACYECGKAFVQHSHLIQHQRVHTGEKPYVCNECGHAFSARRSLIQHERIHTGEKPFQ
CTECGKAFSLKATLIVHLRTHTGEKPYECNSCGKAFSQYSVLIQHQRIHTGEKPYECGEC
GRAFNQHGHLIQHQKVHRKL
Download sequence
Identical sequences 10141.ENSCPOP00000001346 ENSCPOP00000001346 ENSCPOP00000001346

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