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Domain assignment for ENSCPOP00000013135 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000013135
Domain Number 1 Region: 356-458
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 1.03e-25
Family Hypoxia-inducible factor Hif2a, C-terminal domain 0.0015
Further Details:      
 
Domain Number 2 Region: 165-219,246-261,289-307
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 4.75e-16
Family BphP N-terminal domain-like 0.054
Further Details:      
 
Domain Number 3 Region: 83-166
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 0.00000000000000275
Family HLH, helix-loop-helix DNA-binding domain 0.0022
Further Details:      
 
Domain Number 4 Region: 566-729
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 0.0000000118
Family Tetraviridae-like VP 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000013135   Gene: ENSCPOG00000014578   Transcript: ENSCPOT00000014723
Sequence length 784
Comment pep:novel scaffold:cavPor3:scaffold_2:11828332:11866009:-1 gene:ENSCPOG00000014578 transcript:ENSCPOT00000014723 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
EMTSDVPSLGPSIASGNPGPGIQGGGAIVQRAIKRRPGIVSEIPGTLIFFSFRCDDDQMS
NDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDK
LTILRMAVSHMKSLRGTGNTSTDGSYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVY
VSDSVTPVLSQPQSEWFGSTLYDQVHPDDVDKLREQLSTSESALTGRILDLKTGTVKKEG
QQSSMRMCMGSRRSFICRMRCGNSSVDPVSMNRLSFVRNRCRNGLGSVKDGEPHFVVVHC
TGYIKAWPPAGVSLPDDDPEAGQGSKFCLVAIGRLQASVTSSPNCTDMSNVCQPTEFISR
HNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVM
FRFRSKTREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQEPRPTLSNTVQRSQLGS
TANLPLEMGSGQLAPRQQQQQTELDMVSGRDGLASYNHSQVSVQPVASTGPEHSKTLEKS
DVLFAQDRDPRFSEIYSNINADQSKGISSSTVPATQQLFSQGNSFPPNPRPAENFRNSGL
APSVTIVQPSSSAGQILAQISRHSNPSQGAAPTWTPSTRSGFSAQQVATQATAKTRSSQF
GVGNFQTPSSFSPMSLPGAPTASPGAATYPTLTNRGSNFAPEAGQTAGQFQTRTAEGVGV
WPQWQGQQPHHRSSSSEQHVQQPSAQQPSQPEVFQEMLSMLGDQSNSYNNEEFPDLAMFP
SFSE
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Identical sequences ENSCPOP00000013135

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