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Domain assignment for ENSCPOP00000012130 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000012130
Domain Number 1 Region: 229-276
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.0000000272
Family Retrovirus zinc finger-like domains 0.0015
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000012130
Domain Number - Region: 337-362
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000173
Family Retrovirus zinc finger-like domains 0.0053
Further Details:      
 
Domain Number - Region: 296-321
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000586
Family Retrovirus zinc finger-like domains 0.0081
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000012130   Gene: ENSCPOG00000013472   Transcript: ENSCPOT00000013606
Sequence length 472
Comment pep:known_by_projection scaffold:cavPor3:scaffold_27:17461318:17668033:1 gene:ENSCPOG00000013472 transcript:ENSCPOT00000013606 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MFGGYETIEAYEDDLYREESSSELSVDSEVEFQLYSQVHYAQDLSNAIREEGLEEKNSGN
SELNTEVHQNLIVLSDSEVIQLSDESDVITLSDEDSIYRCKRKNIRVQTQKKTRGPPASP
YSDELADQKCKQEIEKPKPEERSGVTQEVMVIEVSSSEEEESITSESENVESWMLLGCEV
DEKDDDILLNLVGCESSVTEDDVHWFISDKDVEAQIGNNRSSGRWTRRYYSADKNVTCRN
CDKCGHLSKNCPLPQKVRACCLCSERGHLQYSCPARFCLDCSLPMSSTHRCLERSSWRKR
CDRCDMIGHYADACPEIWRQYHLTTKPGPPKKPKTPSGQSAFVYCYNCAQKGHYGHECTE
RRMFNQTFPTSPFIYYYDDKYEIRERDQRIKRKVKELKKNGDFPRQFKRSYMEAADKRPH
NDKRKSYASQENYRWHQGDKEAQREMMSRSRDPEKHRKVGRHWEANEDFPRG
Download sequence
Identical sequences ENSCPOP00000012130 10141.ENSCPOP00000012130 ENSCPOP00000012130

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