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Domain assignment for gi|37522063|ref|NP_925440.1| from Gloeobacter violaceus PCC 7421

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|37522063|ref|NP_925440.1|
Domain Number 1 Region: 784-1008
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 4.32e-47
Family Multidrug efflux transporter AcrB transmembrane domain 0.0000494
Further Details:      
 
Domain Number 2 Region: 291-491
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 4.71e-47
Family Multidrug efflux transporter AcrB transmembrane domain 0.0000442
Further Details:      
 
Domain Number 3 Region: 42-136
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 1.57e-23
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0024
Further Details:      
 
Domain Number 4 Region: 139-183,269-321
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 5.34e-19
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0058
Further Details:      
 
Domain Number 5 Region: 548-644
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 2.88e-16
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0076
Further Details:      
 
Domain Number 6 Region: 184-266
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.00000000000144
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.008
Further Details:      
 
Domain Number 7 Region: 697-785
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.000000000445
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|37522063|ref|NP_925440.1|
Sequence length 1039
Comment AcrB/AcrD/AcrF family protein [Gloeobacter violaceus PCC 7421]
Sequence
MNWNISAWSIRNPVPTIVLFLVLTVAGIVSFFSLGIDENPNIDVPVVAVTVTQTGAAPQE
LETQVTRKVEDSVAGVGNVEHIISTVNDGVSNTTIRFVLGTNTDRAVNDVRDAVTKIRQQ
LPQGINEPIIQRIDFSGGPFISYTISADKRSAVELSWLVDNDIARSLLSVPGVSQVQRSG
GVDREIRINLDPNRLQALGVTADQVNAQIRSLNIDLPGGRGEVGPSEQAIRTLGSAPTIE
RLRSTQIALPNGTLARLDTIGTVTDGPAEQRQLAFLNGKPAVSFSVIRSTGSNLVDVEKG
VEKKVEELRKSMPGDIRIQMIRTTADFVHMSYDASIEALLLGAGLAVVVIWFFLRDWRST
FIAGLAMPLSAIPTFAVMKVAGFTLNNMSLLALALVVGILVDDAIVEIENIVRHIGMGKR
PFQAALDAADEIGLAVVATTMTIVVVFVPVAFMGGIPGQFFRQFGWTVAAAVLFSLVVAR
MATPLMAAYLMKPLPHAEEKGRLVRTYDRVLGWALAHRVWTLVFAVAFFAGSVALIPLLP
TSLIGAVDRGETVLSVDLPPGSSLQDTRRKVDQITRIVQARPEVTKIFASVGTPSTQGSY
SAGEVNKASLYIVLKPREERSISQEQFEAQIREPLKQVAGVRITTAGTGVSGGKPMQIVL
TGDDPVTLNRAADALTNQMRSQPGLIDVTSSAALLRPEILVRPDFARAADQGVSVQSIAR
TALIATLGDIDANLAKFNLSDRQINIRVQLDPAFRADLATVENLRVVGNNGLVPLKSVAD
ISVGSGAAQIDRYDRARKVSIEANLAPGTELGTALRTVRKLSAFMNLPAGVKEQPAGDSE
IQRDVFSGFMYAIAAAVLLIYAVLVLLFGGFLQPLTIMMSLPLSLGGAFIGLLFFGKSLG
LYALIGIIMLMGLVTKNAILLVEYCLMAMKEGRPRLEALMSAGEARMRPILMTTIAMIAG
MMPIALGIGAGSEVRSPMAVAVVGGLITSTLLTLVIIPVVFTYVDDLQNWLLGNFRRAPR
ELSEAYRTPTVPVPSQQQE
Download sequence
Identical sequences Q7NHP1
NP_925440.1.44878 251221.gll2494 gi|37522063|ref|NP_925440.1|

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