SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|37522554|ref|NP_925931.1| from Gloeobacter violaceus PCC 7421

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|37522554|ref|NP_925931.1|
Domain Number 1 Region: 104-411
Classification Level Classification E-value
Superfamily C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 2.09e-23
Family C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|37522554|ref|NP_925931.1|
Sequence length 460
Comment hypothetical protein gll2985 [Gloeobacter violaceus PCC 7421]
Sequence
MGVAVKDFTRGRWLWVVGIVAAIAIVGLVSVADPLPVAERASDRRPLPFAGRALLIASDG
DMVGTAYSDGKLNRLSGIEDALTVIDLPLPAAASKVASVAVSNSVMSWPQILATAPDGSR
AYVVEVRGRPPQGVQEYADLDTGMPTGSLLTVVDLTHPGGPTVLETVPVGRNPRQIAISP
DGRLLAIGVEEPGRELLLVELVAGRPGRRFSYAIADASGQSARITSVGWHPSGRFLALNL
NDREMAFFEVLTDQKAATATLRPQGERLVTGVRLGVGRFSPDGRHYLLTDLKWGERPLGY
LLNPRGELIAVRFDAGPALGAKHRVVCRIEVGLSPEGFAVSPDGLLVATVNMRRTYLPDW
LPVWPGKARSSLSLVKRNPQSGQLTVVGEYGFEGVLPEDAVFDAAGRALAVAVYHYREPR
ASVQNQQLTVEAASSFLETTSTSFAYAAFCLAAASGTLTR
Download sequence
Identical sequences Q7NCJ4
gi|37522554|ref|NP_925931.1| 251221.gll2985 NP_925931.1.44878

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]