SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGGOP00000024411 from Gorilla gorilla 76_3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGGOP00000024411
Domain Number 1 Region: 303-476
Classification Level Classification E-value
Superfamily PAP/OAS1 substrate-binding domain 3.14e-36
Family RNA editing terminal uridyl transferase 2, RET2, domain 2 0.0043
Further Details:      
 
Domain Number 2 Region: 150-299
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 4.96e-33
Family Catalytic subunit of bi-partite nucleotidyltransferase 0.047
Further Details:      
 
Weak hits

Sequence:  ENSGGOP00000024411
Domain Number - Region: 10-132
Classification Level Classification E-value
Superfamily beta-sandwich domain of Sec23/24 0.0732
Family beta-sandwich domain of Sec23/24 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGGOP00000024411   Gene: ENSGGOG00000023154   Transcript: ENSGGOT00000029360
Sequence length 484
Comment pep:known_by_projection chromosome:gorGor3.1:17:17974207:18046195:-1 gene:ENSGGOG00000023154 transcript:ENSGGOT00000029360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MFPNSILGRPPFTPNHQQHNNFFTLSPTVYSHQQLIDAQFNFQNADLSRAVSLQQLTYGN
VSPIQTSASPLFRGRKRLSDEKNLPLDGKRQRFHSPHQEPTVVNQIVPLSGERRYSMPPL
FHTHYVPDIVRCVPPFREIAFLEPREITLPEAKDKLSQQILELFETCQQQISDLKKKELC
RTQLQREIQLLFPQSRLFLVGSSLNGFGTRSSDGDLCLVVKEEPCFFQVNQKTEARHILT
LVHKHFCTRLSGYIERPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYL
ENRVRPLVLVIKKWASHHQINDASRGTLSSYSLVLMVLHYLQTLPEPILPSLQKIYPKKL
YISVQAHKQQVKICNPKIYLLKRNSFLGDFLRLFIMLYKTEFVWNSQMISVREAKAIPRP
DGIEWRNKYICVEEPFDGTNTARAVHEKQKFDMIKDQFLKSWHRLKNKRDLNSILPVRAA
VLKR
Download sequence
Identical sequences ENSGGOP00000024411 ENSGGOP00000018910

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]