SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGGOP00000027662 from Gorilla gorilla 76_3.1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGGOP00000027662
Domain Number 1 Region: 54-94,123-206
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.48e-16
Family Canonical RBD 0.01
Further Details:      
 
Domain Number 2 Region: 285-391
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.00000000000103
Family Canonical RBD 0.0064
Further Details:      
 
Domain Number 3 Region: 214-242
Classification Level Classification E-value
Superfamily Ran binding protein zinc finger-like 0.0000012
Family Ran binding protein zinc finger-like 0.0026
Further Details:      
 
Weak hits

Sequence:  ENSGGOP00000027662
Domain Number - Region: 748-804
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00226
Family Classic zinc finger, C2H2 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGGOP00000027662   Gene: ENSGGOG00000007869   Transcript: ENSGGOT00000030018
Sequence length 930
Comment pep:known_by_projection chromosome:gorGor3.1:X:47950288:47992374:1 gene:ENSGGOG00000007869 transcript:ENSGGOT00000030018 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEYERRGGRGDRTGRYGATDRSQDDGGENRSRDHDYRDMDYRSYPREYGSQEGKHDYDDS
SEEQSAEDSYEASPGSETQRRRRRRHRHSPTGPPGFPRDGDYRDQDYRTEQGEEEEEEED
EEEEEKASNIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSH
LQDATRWMEANQHSLNILGQKVSMHYSDPKPKINEDWLCNKCGVQNFKRREKCFKCGVPK
SEAEQKLPLGTRLDQQTLPLGGRELSQGLLPLPQPYQAQGVLASQALSQGSEPSSENAND
TIILRNLNPHSTMDSILGALAPYAVLSSSNVRVIKDKQTQLNRGFAFIQLSTIVEAAQLL
QILQALHPPLTIDGKTINVEFAKGSKRDMASNEGSRISAASVASTAIAAAQWAISQASQG
GEGTWATSEEPPVDYSYYQQDEGYGNSQGTESSLYAHGYLKGTKGPGITGTKGDPTGAGP
EASLEPGADSVSMQAFSRAQPGAAPGIYQQSAEASSSQGTAANSQSYTIMSPAVLKSELQ
SPTHPSSALPPATSPTAQESYSQYPVPDVSTYQYDETSGYYYDPQTGLYYDPNSQYYYNA
QSQQYLYWDGERRTYVPALEQSADGHKETGAPSKEGKEKKEKHKTKTAQQIAKDMERWAR
SLNKQKENFKNSFQPISSLRDDERRESATADAGYAILEKKGALAERQHTSMDLPKLASDD
RPSPPRGLVAAYSGESDSEEEQERGGPEREEKLTDWQKLACLLCRRQFPSKEALIRHQQL
SGLHKQNLEIHRRAHLSENELEALEKNDMEQMKYRDRAAERREKYGIPEPPEPKRRKYGG
ISTASVDFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLG
ARGSSYGVTSTESYKETLHKTMVTRFNEAQ
Download sequence
Identical sequences A0A0S2Z4W4 A0A2J8JWT3 A0A2J8WIJ5 P98175
NP_005667.2.87134 NP_005667.2.92137 XP_004064109.1.27298 XP_008960194.1.60992 XP_016798187.1.37143 gi|20127479|ref|NP_005667.2| 9606.ENSP00000366829 ENSP00000366829 ENSGGOP00000027662 ENSP00000366829 ENSP00000474744 ENSP00000328848

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]