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Domain assignment for gi|568285293|ref|YP_008973483.1| from Leisingera methylohalidivorans DSM 14336

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|568285293|ref|YP_008973483.1|
Domain Number 1 Region: 299-520,558-772
Classification Level Classification E-value
Superfamily PLP-dependent transferases 2.53e-76
Family Ornithine decarboxylase major domain 0.00057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|568285293|ref|YP_008973483.1|
Sequence length 913
Comment ornithine decarboxylase [Leisingera methylohalidivorans DSM 14336]
Sequence
MNLQLKKKFPSIRDYYSATQLRADRWSALREAAEGLSRHRADSRQGKKLMTTAEHLFEVL
APIERYWAFPGIHAFEHLRRLLQLGNTGDLSTAVRRIARALTSGAYRRRSIPLSSDEIDN
EDYEDEASLAPEARALGRPYFEVLIVDDVSESQERFLRQNLLRMRRVEDPFIYEPVIVPS
LEDALIGVLFNYNVQAVVVRPGLSLKSKIELPILSQYLTRVSEAEEVDAIEPHEYGPVSC
RLIEKIRPELDAYLVTDRSAEEIAGLDLGRCRRVFYNQEDFQELHLNVLRGVDRRYKSPF
FTALKEYSKQPTGVFHAMPISRGKSISRSHWIQDMGAFYGSNIFLAETSATSGGLDSLLE
PRGPIKEAQDMAARAFGAKHTFFATNGTSTCNKIVVQSVVRPGDIVLVDRDCHKSHHYGM
VLAGASVVYMDSYPLHEHSMYGAVPLREIKHTLLQLLAAGKLDRVRMVLLTNCTFDGIVY
NVQRVMEECLAIKKDLIFLWDEAWFAFARFDPTYRQRTAMGVANTLRQTLRTPEAKAAWE
AQQEALKDADEAKWLDTRLVPPPDARVRAYATQSTHKTLTSLRQGSMIHVNDQDFKGEVE
QAFHEAYMTHTSTSPNYQIIASLDVGRRQVELEGFEFVQKQIESAMSIRRAISDNPLLQK
YFRVLTAGDMIPEPFRESGVDAYYDPDHGWADTWHMWREDEFVLDPTRVTLAVGGTGWDG
DTFKTKILMDKYGIQINKTSRNTVLFMTNIGTTRSSVAYLIEVLVEIANELDELLDDASK
MERRSFDNRVSALIEHVPPLPDFSRFHDAFRAGAETPEGDIRTAFFLAYNEDYCDYIPAD
DALMQRLEAGEELVSTSFIIPYPPGFPILVPGQVISPEIMSFMRALDVSEIHGYREDLGL
RVFTKEALQSVQK
Download sequence
Identical sequences V9VXV0
gi|568285293|ref|YP_008973483.1| WP_024092062.1.64

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