SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|331703810|ref|YP_004400497.1| from Mycoplasma mycoides subsp. capri LC str. 95010

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|331703810|ref|YP_004400497.1|
Domain Number 1 Region: 515-588
Classification Level Classification E-value
Superfamily Glucose permease domain IIB 8.24e-18
Family Glucose permease domain IIB 0.00047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|331703810|ref|YP_004400497.1|
Sequence length 725
Comment PTS system glucose specific transporter subunit IIBC [Mycoplasma mycoides subsp. capri LC str. 95010]
Sequence
MPTLSKLSKAFLLPIALLPIAGVFLGVGAAIAANTTPQSALWFIGKVMGNMGDVCFGNLP
VLFCISVALAYTKDSGVAAITAVVGFLVFNGVQAPLFIAPAAKTNDKVFEYGLLWYKHVS
NSLTGSNMGILSLNTGVLGGIFVGAIAAKCYNKFHQTQLPTAISFFSGTKLVPIITFVAV
IPLSFIFMMAWPVIGLGLNKFGQVSGTLPYGTDSLIFEIVERSLVPFGLHHVFYAPLWWT
SAGGSIAEGFNNLSKQSEAIQKVFVVSYNSLHGTHHTKLQEIIDIVQKNKELWGAVGDQI
ISQRVIGHLNILNFTDVEKLGINLGRFQSGKFGFMLLGLPSAALAMWLAAPKENRQQVFG
IYFSAAFTCFLTGITEPIEYTFLFVAPWLFYGVHMPLASIAFWATGALQTHITQTVSGGI
IDYIVFGIIPFISGAMKPISAFGVLGVAVVLAPIYFCAFYFLIKLFNVKTPGRDGNAEAK
LYTKADFKASKGLNVDGSKMSSSTDDKEQARLAKAAAIIEYLGGEENIVDVDSCASRLRL
TVVDAKKADIDGIKSLGGTTGALVKGNNIQIVYGGEQEAIKPRMQKLLEQQRQEKMMSHS
EMKSEEMKSENMGMTCESDQACDKKDEACGCEKDCMCEEPNKVQEQPVSEMKVEEKVVDE
MKVEKPKATRTKSTKAKSSTSKSTKSTSKSSSKSTKSTSSKTKSSTSKPKTTKAKSTSSK
TKTTK
Download sequence
Identical sequences F4MQY6
gi|331703810|ref|YP_004400497.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]