SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|379004949|ref|YP_005260621.1| from Pyrobaculum oguniense TE7

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|379004949|ref|YP_005260621.1|
Domain Number 1 Region: 3-237
Classification Level Classification E-value
Superfamily Acyl-CoA dehydrogenase NM domain-like 1.31e-63
Family Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains 0.0000128
Further Details:      
 
Domain Number 2 Region: 224-376
Classification Level Classification E-value
Superfamily Acyl-CoA dehydrogenase C-terminal domain-like 1.65e-50
Family Medium chain acyl-CoA dehydrogenase-like, C-terminal domain 0.0000858
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|379004949|ref|YP_005260621.1|
Sequence length 380
Comment acyl-CoA dehydrogenase [Pyrobaculum oguniense TE7]
Sequence
MYMLSEEHKLTVKVIREFVDQHVRPKARSIDKGEYPRQLLKLLGELNILVPTLPPDVGGA
GADTLTQVLVVEELAKASPGLATIMEIQSSMLAENLYHNGNKVHREEVVPKLASGEAVGA
FALSEPCCGSDAAAIQTRAERRGGEWVINGTKMWITSGLYADYYLVFARSGPAEARHRAI
TAFLLHRNSCIEATPIEVMGVRGTGTAEVRLNDCRAGDDDVVGEVNGGWKIAMWGINMGR
LNVGAIGLGIAEEALREAYIYAQRRIAFGKAISEFQIIQHYLAEMYARTEALRSVVYTAA
KMRDAGDSDFPLYAQVAKLLGSRTAVDVVRLALQIQGGYGYSTDSPLEMLYRDAKVTEIY
EGTNEIILNTIYKFMREKFA
Download sequence
Identical sequences H6QCP6
gi|379004949|ref|YP_005260621.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]