SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for jgi|Phybl1|76707|estExt_fgeneshPB_pg.C_40171 from Phycomyces blakesleeanus

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Phybl1|76707|estExt_fgeneshPB_pg.C_40171
Domain Number 1 Region: 18-105
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 9.25e-21
Family Linker histone H1/H5 0.0011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Phybl1|76707|estExt_fgeneshPB_pg.C_40171
Sequence length 300
Sequence
MATTTAAAATPKVKSATKKAEHPTYEDMIKDAVLSLKERKGSSRPAIKKYILANFAVSSG
PHFDSQISAAIKRGSAKDLFALPKGLSGTVKLKKVEKKVEKKTEKKTAKKVEKKTAKKTE
KKAAEKTDEKKADDKATDADEKVEKKTTKKAPTKKAAAPKKAAAKKASPTKKTTAEKAGV
KAPTKKAAATKKAAPKKAAPKKKAAAASTESASAESTEDKKSEDKKAEKKTTKKAPTKKA
AAPKKAAAKKASPTKKTTAEKAGVKAPTKKAAAAKKTEKTEKKAAAPKKTAAAAKKATKA
Download sequence
Identical sequences jgi|Phybl1|76707|estExt_fgeneshPB_pg.C_40171

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]