SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSP00000439209 from Homo sapiens 76_38

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSP00000439209
Domain Number 1 Region: 173-421
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 3.01e-77
Family Neurotransmitter-gated ion-channel transmembrane pore 0.000000168
Further Details:      
 
Domain Number 2 Region: 1-173
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 3.14e-44
Family Nicotinic receptor ligand binding domain-like 0.0035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSP00000439209   Gene: ENSG00000170175   Transcript: ENST00000536404
Sequence length 429
Comment pep:putative chromosome:GRCh38:17:7445503:7456926:1 gene:ENSG00000170175 transcript:ENST00000536404 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSTKVYLDLEWTDYRLSWDPAEHDGIDSLRITAESVWLPDVVLLNNNDGNFDVALDISVV
VSSDGSVRWQPPGIYRSSCSIQVTYFPFDWQNCTMVFSSYSYDSSEVSLQTGLGPDGQGH
QEIHIHEGTFIENGQWEIIHKPSRLIQPPGDPRGGREGQRQEVIFYLIIRRKPLFYLVNV
IAPCILITLLAIFVFYLPPDAGEKMGLSIFALLTLTVFLLLLADKVPETSLSVPIIIKYL
MFTMVLVTFSVILSVVVLNLHHRSPHTHQMPLWVRQIFIHKLPLYLRLKRPKPERDLMPE
PPHCSSPGSGWGRGTDEYFIRKPPSDFLFPKPNRFQPELSAPDLRRFIDGPNRAVALLPE
LREVVSSISYIARQLQEQEDHDALKEDWQFVAMVVDRLFLWTFIIFTSVGTLVIFLDATY
HLPPPDPFP
Download sequence
Identical sequences ENSP00000439209 ENSP00000439209

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]