SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSP00000405987 from Homo sapiens 76_38

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSP00000405987
Domain Number 1 Region: 416-748
Classification Level Classification E-value
Superfamily L domain-like 2.38e-62
Family Internalin LRR domain 0.0058
Further Details:      
 
Domain Number 2 Region: 145-451
Classification Level Classification E-value
Superfamily L domain-like 4.68e-56
Family Leucine rich effector protein YopM 0.032
Further Details:      
 
Weak hits

Sequence:  ENSP00000405987
Domain Number - Region: 758-850
Classification Level Classification E-value
Superfamily DEATH domain 0.000194
Family DEATH domain, DD 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSP00000405987   Gene: ENSG00000240720   Transcript: ENST00000458448
Sequence length 860
Comment pep:known chromosome:GRCh38:7:92144842:92179133:-1 gene:ENSG00000240720 transcript:ENST00000458448 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSEKEGMSEVLEDTISQFRKESRSQSMKEPGFIKETSNLINEASDYLEGKSSNQIYETHP
RQNTLESTSSSGRKSKRNEEQKKNLQFSETSTRTGTSQSLSSLTGRTAEYQALVNFLSHE
TVGEVSPQVSEENQKQLGLGADNFTVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQ
GADSGDLLGLEILSLQENGLSSLPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLF
FYNNYIENFPSDLECLGNLEILSLGKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKALC
FLPKLISLDLTGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQLLKIKELQLADNK
LEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKYIHKLNNL
RKLHVNRNNMVKITDCISHLNNICSLEFSGNIITDVPIEIKNCQKIIKIELSYNKIMYFP
LGLCALDSLYYLSVNGNYISEIPVDISFSKQLLHLELSENKLLIFSEHFCSLINLKYLDL
GKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLQVLDLSENQLQKISSDICN
LKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTRLPGELSNMTQLKELDISN
NAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSAIYNIF
SLKEINFDDNPLLRPPVEICKGKQLYTIARYLQRADERDEKILEKIFKIVANNITETNFE
FLCQKLNLANSETDMPTKSTVSLSERAHQALVIWKTQSNKLSLTAAALRDQLIRALTMIG
AYEIMDKITALNLFTRAIKF
Download sequence
Identical sequences A4D1F6
gi|238908508|ref|NP_001155000.1| NP_001155000.1.87134 NP_001155000.1.92137 ENSP00000405987 ENSP00000411568 ENSP00000405987 ENSP00000411568 9606.ENSP00000411568 ENSP00000387628

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]