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Domain assignment for Smp_078920 from Schistosoma mansoni

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Smp_078920
Domain Number 1 Region: 33-312,667-747,789-909
Classification Level Classification E-value
Superfamily ARM repeat 1.5e-22
Family PBS lyase HEAT-like repeat 0.087
Further Details:      
 
Weak hits

Sequence:  Smp_078920
Domain Number - Region: 552-583
Classification Level Classification E-value
Superfamily C-terminal UvrC-binding domain of UvrB 0.0262
Family C-terminal UvrC-binding domain of UvrB 0.0089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Smp_078920
Sequence length 1301
Comment ||29329.m000192, 29329.t000004|expressed protein|Schistosoma mansoni|chr unknown01|||Auto
Sequence
MPTIPKDSESEILEVFEECQLNNLSHDRLCVKLKNIYDNTRFTHFADDFFELCRYSLVSS
ERSLYRERTIDFITKFALFCGKSDDSNQDTLNNRLLLKLFLFCIKYNECPNPAVRFRCMQ
IIHKLLDGIGDNGIMPEELYRSLQSILLRRVYDTKVSVRVEAIQALSRMQDPTDAECPVV
EAFIWLTRHDPTAEVRRAALAAMVLTTRTLPSLVERCRDLADNVRRAAYKLLASRGILRP
LSIAKRIRILQDGLSDRSEEVRKATKELVLAWFNGTNRDPVLLLRRLDPEGDPSTSQKAL
DSLFEMLSPDDLLKVVQEWSPNYLTSDRILKSDCLTPEATFFWRALVEFIHKRQINANDT
TTTTIKSAVHPEHEDNNEENNPLQRLADIVQPSVSVYVDLAKTVVDKLVQTVLAQEFDEK
AIEQECVVEQILSMAGSLDLSDEFGRRRLVSLVHDWITSQQVSGTLAPQLLKLHAILEPN
LRRRINSVIEMISELCDPVEPQNSLGSAVSVPVESNENGCLTKETECTNQQPALSKKKEI
SIRLKIASLEVRMNELNEALHDCVSRKEFERATELRDACNKLDIERTELLQELRGNIGIL
TDKPPVSPSSGSDEQIKSVTKEDLNTENPDGGLFKRCSSSVLFKANKMAALIIQQSPTLW
SLPASLRSLLDSLILPSMQHSDVAVRNQAILALGLCCTMDLPLTLQYIHAMRVDHLMISE
TALGCIIDCLLIYGFRPFHDANINPNSRLVPTDTIIVDEDDDDEEEQNIKASKHDYVVLT
RQTSQDSIDQSHSNPLGILVRCDEMSKTAYRLLKPITSLLEKESDDGLRSTSALGLAKLL
IYDRIVSSHILSLLLLLWFNPVSEESPQLRRGLAYFFADYACANGIGMDAFEHQSALTNA
VLPTLTTLIRAPASSPLSEVEPNDVASLLARLTDTTHLKSRSEGKNVTVNQEGKDIVNDD
NEDSRPNSNKSKTISSSTGQIDEKIINPHHDRLVSILATEVLKAPQSAEAKLYLRMIFQL
RPSTENIQVHKELLTLVDSMSKFADRSLNLTLHRFRKQLIEKMERLGIDSKKLNESIISE
NGNDKINTSPLHDDDDDSNHTIMNNEGIQQSQPTLLGSARVNFHLVNSSEHHIIEKNQGN
ATMIFSQSNRTMTAVGNPLLDKSSHQNLLDFSDDDDEEEKVDCDLTPTSIPVSSTNPSSK
QIKPKKNTATVVTRQKNVNNNSQKNPIHKISRGKVVLQSSDNENSNSVKSHSTTNSRSRN
PKKLKHSQKKIDTSSSSPTSSVSSSRRSTRLSSAQKSDRRI
Download sequence
Identical sequences Smp_078920

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