SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSDORP00000002643 from Dipodomys ordii 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSDORP00000002643
Domain Number 1 Region: 380-573
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 3.52e-18
Family Laminin G-like module 0.029
Further Details:      
 
Domain Number 2 Region: 590-737
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.00000000000000989
Family Laminin G-like module 0.012
Further Details:      
 
Domain Number 3 Region: 775-802,830-936
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.000000000000871
Family Laminin G-like module 0.01
Further Details:      
 
Domain Number 4 Region: 282-324
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000025
Family EGF-type module 0.0041
Further Details:      
 
Domain Number 5 Region: 114-156
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000251
Family EGF-type module 0.0045
Further Details:      
 
Domain Number 6 Region: 72-115
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000196
Family EGF-type module 0.011
Further Details:      
 
Domain Number 7 Region: 192-233
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000529
Family EGF-type module 0.0038
Further Details:      
 
Domain Number 8 Region: 152-191
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000354
Family EGF-type module 0.0072
Further Details:      
 
Domain Number 9 Region: 37-82
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000219
Family EGF-type module 0.0075
Further Details:      
 
Domain Number 10 Region: 320-362
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000339
Family EGF-type module 0.0073
Further Details:      
 
Domain Number 11 Region: 1131-1165
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000691
Family EGF-type module 0.0051
Further Details:      
 
Domain Number 12 Region: 230-288
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000566
Family EGF-type module 0.0082
Further Details:      
 
Weak hits

Sequence:  ENSDORP00000002643
Domain Number - Region: 1096-1127
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0482
Family Laminin-type module 0.053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSDORP00000002643   Gene: ENSDORG00000002814   Transcript: ENSDORT00000002813
Sequence length 1166
Comment pep:known_by_projection genescaffold:dipOrd1:GeneScaffold_3831:32822:45544:1 gene:ENSDORG00000002814 transcript:ENSDORT00000002813 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
TGPSETPSPCASDPCAPGTECQAMENGSYTCALTESRGCATQPCHHGALCVPQGPDPSDF
RCYCVPGFQGQHCELDIDECASRPCHHGATCHNLADRYECHCPLGYTGVTCAEEVDECVS
APCLHGGSCLDGVGSYRCVCAPGYAGASCQLDVDECQSQPCAHGGVCHDLVNGFRCDCAD
TGYEGVRCEQEVLECASAPCAHNATCLDGLGSFRCLCWPGFSGERCEVDEDECAPGPCRH
GGRCLQRSDPALYQPGAFDFRRAAGFWCRCPAGFEGEDCGVDVDECASRPCLHGGRCQDL
PNGFQCHCPAGYAGLACQEDVDECLSEPCLHGGTCDDKVAGYACRCAEAWGGHDCSVQLT
GCQGHACPPAATCIPTFQSGVHGYVCRCPPGSHGPSCGHNTTFSVLAESPVRASVPAGGP
LGLALRFRTTLSAGILATRTDTQDSLELALVGATLQATLWSRGGTPLVLRLPGRTLSDGH
WHRVEVELRLGILHLRLWHEGCPAQLCMASGPVAPGPVASVAPGPAGPCAVQLGGSAFAG
CLQDVRVDGHLLLPEDLGADVHRGCERQEQCQPPPCAHGGTCEDLWTRFRCTCPRPYGGP
TCADESPAATFGLGGALSSASFLLPERPGPNLTVSFLVRTREPAGLLLQFANDSAAGLTI
FLWEGQVQALVRGGPALVLPGRRDDGLQHLVTLGFGPEQLQDLGQQVHVGGRPEPADTRP
WGGPFQGCLPGLRDGHFPFFPRPTENSSXXXXXXXXXXXXXXXXXXXXXXXXPDPCLNGG
TCLVTWNDFNCTCPDNFTGPTCAQQRWCPSQPCLPPATCEEVPDGFVXXXXXXXXXXXXV
EFRGHNASAGRWLGGGLSLAFRTRDADAGMLRADAGAGAGVWLAVRNGSLVAHVHRGGGA
GAALPAPGPRVADGAWHRVRLAAAAERWLLWLDGAHIXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXLPVLPEECSLNATCPDGVLCEAATQGTNCSCPEALAGRRCQRPALACKANPCLNG
GTCRASGGAYECSCRIGFSGQFCEVV
Download sequence
Identical sequences ENSDORP00000002643 ENSDORP00000002643

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]